Gene : Cucsa.142670 C. sativus v1.0
Defline:  (1 of 1) PTHR21499:SF33 - HOMOSERINE DEHYDROGENASE Genomic Order:  114
Name:  ? Cucsa.142670 Secondary Identifier:  ? PAC:16963671
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus HOMOSERSYN-PWY Cucumis sativus pathologic  
Csativus PWY-3001 Cucumis sativus pathologic  
Csativus PWY-724 Cucumis sativus pathologic  
Csativus THRESYN-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.142670 0.5kb upstream 0.5kb upstream 11359 true scaffold01079: 879263-890621 Cucumis sativus
Cucsa.142670 0.5kb upstream 0.5kb upstream 500 false scaffold01079: 890122-890621 Cucumis sativus
Cucsa.142670 0.5kb downstream 0.5kb downstream 11359 true scaffold01079: 878763-890121 Cucumis sativus
Cucsa.142670 0.5kb downstream 0.5kb downstream 500 false scaffold01079: 878763-879262 Cucumis sativus
Cucsa.142670 1.0kb upstream 1.0kb upstream 11859 true scaffold01079: 879263-891121 Cucumis sativus
Cucsa.142670 1.0kb upstream 1.0kb upstream 1000 false scaffold01079: 890122-891121 Cucumis sativus
Cucsa.142670 1.0kb downstream 1.0kb downstream 11859 true scaffold01079: 878263-890121 Cucumis sativus
Cucsa.142670 1.0kb downstream 1.0kb downstream 1000 false scaffold01079: 878263-879262 Cucumis sativus
Cucsa.142670 2.0kb upstream 2.0kb upstream 12859 true scaffold01079: 879263-892121 Cucumis sativus
Cucsa.142670 2.0kb upstream 2.0kb upstream 2000 false scaffold01079: 890122-892121 Cucumis sativus
Cucsa.142670 2.0kb downstream 2.0kb downstream 12859 true scaffold01079: 877263-890121 Cucumis sativus
Cucsa.142670 2.0kb downstream 2.0kb downstream 2000 false scaffold01079: 877263-879262 Cucumis sativus
Cucsa.142670 5.0kb upstream 5.0kb upstream 15859 true scaffold01079: 879263-895121 Cucumis sativus
Cucsa.142670 5.0kb upstream 5.0kb upstream 5000 false scaffold01079: 890122-895121 Cucumis sativus
Cucsa.142670 5.0kb downstream 5.0kb downstream 15859 true scaffold01079: 874263-890121 Cucumis sativus
Cucsa.142670 5.0kb downstream 5.0kb downstream 5000 false scaffold01079: 874263-879262 Cucumis sativus
Cucsa.142670 10.0kb upstream 10.0kb upstream 20859 true scaffold01079: 879263-900121 Cucumis sativus
Cucsa.142670 10.0kb upstream 10.0kb upstream 10000 false scaffold01079: 890122-900121 Cucumis sativus
Cucsa.142670 10.0kb downstream 10.0kb downstream 20859 true scaffold01079: 869263-890121 Cucumis sativus
Cucsa.142670 10.0kb downstream 10.0kb downstream 10000 false scaffold01079: 869263-879262 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305491 5265 Fabidae View MSA
124062775 5270 Rosid View MSA
123740432 5271 Pentapetalae View MSA
122769980 5272 Eudicot View MSA
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain