Gene : Cucsa.151940 C. sativus v1.0
Defline:  (1 of 1) PTHR33405:SF1 - PROTEIN FLC EXPRESSOR Genomic Order:  34
Name:  ? Cucsa.151940 Secondary Identifier:  ? PAC:16964507
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.151940 0.5kb upstream 0.5kb upstream 4042 true scaffold01119: 258105-262146 Cucumis sativus
Cucsa.151940 0.5kb upstream 0.5kb upstream 500 false scaffold01119: 261647-262146 Cucumis sativus
Cucsa.151940 0.5kb downstream 0.5kb downstream 4042 true scaffold01119: 257605-261646 Cucumis sativus
Cucsa.151940 0.5kb downstream 0.5kb downstream 500 false scaffold01119: 257605-258104 Cucumis sativus
Cucsa.151940 1.0kb upstream 1.0kb upstream 4542 true scaffold01119: 258105-262646 Cucumis sativus
Cucsa.151940 1.0kb upstream 1.0kb upstream 1000 false scaffold01119: 261647-262646 Cucumis sativus
Cucsa.151940 1.0kb downstream 1.0kb downstream 4542 true scaffold01119: 257105-261646 Cucumis sativus
Cucsa.151940 1.0kb downstream 1.0kb downstream 1000 false scaffold01119: 257105-258104 Cucumis sativus
Cucsa.151940 2.0kb upstream 2.0kb upstream 5542 true scaffold01119: 258105-263646 Cucumis sativus
Cucsa.151940 2.0kb upstream 2.0kb upstream 2000 false scaffold01119: 261647-263646 Cucumis sativus
Cucsa.151940 2.0kb downstream 2.0kb downstream 5542 true scaffold01119: 256105-261646 Cucumis sativus
Cucsa.151940 2.0kb downstream 2.0kb downstream 2000 false scaffold01119: 256105-258104 Cucumis sativus
Cucsa.151940 5.0kb upstream 5.0kb upstream 8542 true scaffold01119: 258105-266646 Cucumis sativus
Cucsa.151940 5.0kb upstream 5.0kb upstream 5000 false scaffold01119: 261647-266646 Cucumis sativus
Cucsa.151940 5.0kb downstream 5.0kb downstream 8542 true scaffold01119: 253105-261646 Cucumis sativus
Cucsa.151940 5.0kb downstream 5.0kb downstream 5000 false scaffold01119: 253105-258104 Cucumis sativus
Cucsa.151940 10.0kb upstream 10.0kb upstream 13542 true scaffold01119: 258105-271646 Cucumis sativus
Cucsa.151940 10.0kb upstream 10.0kb upstream 10000 false scaffold01119: 261647-271646 Cucumis sativus
Cucsa.151940 10.0kb downstream 10.0kb downstream 13542 true scaffold01119: 248105-261646 Cucumis sativus
Cucsa.151940 10.0kb downstream 10.0kb downstream 10000 false scaffold01119: 248105-258104 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026776 5273 Angiosperm View MSA
122299801 5265 Fabidae View MSA
124060836 5270 Rosid View MSA
123743028 5271 Pentapetalae View MSA
122794369 5272 Eudicot View MSA
121296551 5274 Embryophyte View MSA
123334697 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain