Gene : Cucsa.149630 C. sativus v1.0
Defline:  (1 of 1) PF13041//PF14700 - PPR repeat family (PPR_2) // DNA-directed RNA polymerase N-terminal (RPOL_N) Genomic Order:  50
Name:  ? Cucsa.149630 Secondary Identifier:  ? PAC:16964303
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.149630 0.5kb upstream 0.5kb upstream 4432 true scaffold01110: 500649-505080 Cucumis sativus
Cucsa.149630 0.5kb upstream 0.5kb upstream 500 false scaffold01110: 500649-501148 Cucumis sativus
Cucsa.149630 0.5kb downstream 0.5kb downstream 4432 true scaffold01110: 501149-505580 Cucumis sativus
Cucsa.149630 0.5kb downstream 0.5kb downstream 500 false scaffold01110: 505081-505580 Cucumis sativus
Cucsa.149630 1.0kb upstream 1.0kb upstream 4932 true scaffold01110: 500149-505080 Cucumis sativus
Cucsa.149630 1.0kb upstream 1.0kb upstream 1000 false scaffold01110: 500149-501148 Cucumis sativus
Cucsa.149630 1.0kb downstream 1.0kb downstream 4932 true scaffold01110: 501149-506080 Cucumis sativus
Cucsa.149630 1.0kb downstream 1.0kb downstream 1000 false scaffold01110: 505081-506080 Cucumis sativus
Cucsa.149630 2.0kb upstream 2.0kb upstream 5932 true scaffold01110: 499149-505080 Cucumis sativus
Cucsa.149630 2.0kb upstream 2.0kb upstream 2000 false scaffold01110: 499149-501148 Cucumis sativus
Cucsa.149630 2.0kb downstream 2.0kb downstream 5932 true scaffold01110: 501149-507080 Cucumis sativus
Cucsa.149630 2.0kb downstream 2.0kb downstream 2000 false scaffold01110: 505081-507080 Cucumis sativus
Cucsa.149630 5.0kb upstream 5.0kb upstream 8932 true scaffold01110: 496149-505080 Cucumis sativus
Cucsa.149630 5.0kb upstream 5.0kb upstream 5000 false scaffold01110: 496149-501148 Cucumis sativus
Cucsa.149630 5.0kb downstream 5.0kb downstream 8932 true scaffold01110: 501149-510080 Cucumis sativus
Cucsa.149630 5.0kb downstream 5.0kb downstream 5000 false scaffold01110: 505081-510080 Cucumis sativus
Cucsa.149630 10.0kb upstream 10.0kb upstream 13932 true scaffold01110: 491149-505080 Cucumis sativus
Cucsa.149630 10.0kb upstream 10.0kb upstream 10000 false scaffold01110: 491149-501148 Cucumis sativus
Cucsa.149630 10.0kb downstream 10.0kb downstream 13932 true scaffold01110: 501149-515080 Cucumis sativus
Cucsa.149630 10.0kb downstream 10.0kb downstream 10000 false scaffold01110: 505081-515080 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237356 5265 Fabidae View MSA
124072513 5270 Rosid View MSA
123747473 5271 Pentapetalae View MSA
122794645 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain