Gene : Cucsa.272080 C. sativus v1.0
Defline:  (1 of 1) KOG3172 - Small nuclear ribonucleoprotein Sm D3 Genomic Order:  105
Name:  ? Cucsa.272080 Secondary Identifier:  ? PAC:16973656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.272080 0.5kb upstream 0.5kb upstream 2904 true scaffold02500: 775292-778195 Cucumis sativus
Cucsa.272080 0.5kb upstream 0.5kb upstream 500 false scaffold02500: 775292-775791 Cucumis sativus
Cucsa.272080 0.5kb downstream 0.5kb downstream 2904 true scaffold02500: 775792-778695 Cucumis sativus
Cucsa.272080 0.5kb downstream 0.5kb downstream 500 false scaffold02500: 778196-778695 Cucumis sativus
Cucsa.272080 1.0kb upstream 1.0kb upstream 3404 true scaffold02500: 774792-778195 Cucumis sativus
Cucsa.272080 1.0kb upstream 1.0kb upstream 1000 false scaffold02500: 774792-775791 Cucumis sativus
Cucsa.272080 1.0kb downstream 1.0kb downstream 3404 true scaffold02500: 775792-779195 Cucumis sativus
Cucsa.272080 1.0kb downstream 1.0kb downstream 1000 false scaffold02500: 778196-779195 Cucumis sativus
Cucsa.272080 2.0kb upstream 2.0kb upstream 4404 true scaffold02500: 773792-778195 Cucumis sativus
Cucsa.272080 2.0kb upstream 2.0kb upstream 2000 false scaffold02500: 773792-775791 Cucumis sativus
Cucsa.272080 2.0kb downstream 2.0kb downstream 4404 true scaffold02500: 775792-780195 Cucumis sativus
Cucsa.272080 2.0kb downstream 2.0kb downstream 2000 false scaffold02500: 778196-780195 Cucumis sativus
Cucsa.272080 5.0kb upstream 5.0kb upstream 7404 true scaffold02500: 770792-778195 Cucumis sativus
Cucsa.272080 5.0kb upstream 5.0kb upstream 5000 false scaffold02500: 770792-775791 Cucumis sativus
Cucsa.272080 5.0kb downstream 5.0kb downstream 7404 true scaffold02500: 775792-783195 Cucumis sativus
Cucsa.272080 5.0kb downstream 5.0kb downstream 5000 false scaffold02500: 778196-783195 Cucumis sativus
Cucsa.272080 10.0kb upstream 10.0kb upstream 12404 true scaffold02500: 765792-778195 Cucumis sativus
Cucsa.272080 10.0kb upstream 10.0kb upstream 10000 false scaffold02500: 765792-775791 Cucumis sativus
Cucsa.272080 10.0kb downstream 10.0kb downstream 12404 true scaffold02500: 775792-788195 Cucumis sativus
Cucsa.272080 10.0kb downstream 10.0kb downstream 10000 false scaffold02500: 778196-788195 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309842 5265 Fabidae View MSA
124071262 5270 Rosid View MSA
123746571 5271 Pentapetalae View MSA
122793733 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain