Gene : Cucsa.271780 C. sativus v1.0
Defline:  (1 of 2) PTHR11850:SF122 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 3-RELATED Genomic Order:  75
Name:  ? Cucsa.271780 Secondary Identifier:  ? PAC:16973601
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.271780 0.5kb upstream 0.5kb upstream 4951 true scaffold02500: 588204-593154 Cucumis sativus
Cucsa.271780 0.5kb upstream 0.5kb upstream 500 false scaffold02500: 588204-588703 Cucumis sativus
Cucsa.271780 0.5kb downstream 0.5kb downstream 4951 true scaffold02500: 588704-593654 Cucumis sativus
Cucsa.271780 0.5kb downstream 0.5kb downstream 500 false scaffold02500: 593155-593654 Cucumis sativus
Cucsa.271780 1.0kb upstream 1.0kb upstream 5451 true scaffold02500: 587704-593154 Cucumis sativus
Cucsa.271780 1.0kb upstream 1.0kb upstream 1000 false scaffold02500: 587704-588703 Cucumis sativus
Cucsa.271780 1.0kb downstream 1.0kb downstream 5451 true scaffold02500: 588704-594154 Cucumis sativus
Cucsa.271780 1.0kb downstream 1.0kb downstream 1000 false scaffold02500: 593155-594154 Cucumis sativus
Cucsa.271780 2.0kb upstream 2.0kb upstream 6451 true scaffold02500: 586704-593154 Cucumis sativus
Cucsa.271780 2.0kb upstream 2.0kb upstream 2000 false scaffold02500: 586704-588703 Cucumis sativus
Cucsa.271780 2.0kb downstream 2.0kb downstream 6451 true scaffold02500: 588704-595154 Cucumis sativus
Cucsa.271780 2.0kb downstream 2.0kb downstream 2000 false scaffold02500: 593155-595154 Cucumis sativus
Cucsa.271780 5.0kb upstream 5.0kb upstream 9451 true scaffold02500: 583704-593154 Cucumis sativus
Cucsa.271780 5.0kb upstream 5.0kb upstream 5000 false scaffold02500: 583704-588703 Cucumis sativus
Cucsa.271780 5.0kb downstream 5.0kb downstream 9451 true scaffold02500: 588704-598154 Cucumis sativus
Cucsa.271780 5.0kb downstream 5.0kb downstream 5000 false scaffold02500: 593155-598154 Cucumis sativus
Cucsa.271780 10.0kb upstream 10.0kb upstream 14451 true scaffold02500: 578704-593154 Cucumis sativus
Cucsa.271780 10.0kb upstream 10.0kb upstream 10000 false scaffold02500: 578704-588703 Cucumis sativus
Cucsa.271780 10.0kb downstream 10.0kb downstream 14451 true scaffold02500: 588704-603154 Cucumis sativus
Cucsa.271780 10.0kb downstream 10.0kb downstream 10000 false scaffold02500: 593155-603154 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307685 5265 Fabidae View MSA
124065932 5270 Rosid View MSA
123749980 5271 Pentapetalae View MSA
122794355 5272 Eudicot View MSA
122041935 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain