Gene : Cucsa.271900 C. sativus v1.0
Defline:  (1 of 1) PTHR10357:SF118 - ALPHA-AMYLASE 2-RELATED Genomic Order:  87
Name:  ? Cucsa.271900 Secondary Identifier:  ? PAC:16973625
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.271900 0.5kb upstream 0.5kb upstream 5560 true scaffold02500: 657283-662842 Cucumis sativus
Cucsa.271900 0.5kb upstream 0.5kb upstream 500 false scaffold02500: 657283-657782 Cucumis sativus
Cucsa.271900 0.5kb downstream 0.5kb downstream 5560 true scaffold02500: 657783-663342 Cucumis sativus
Cucsa.271900 0.5kb downstream 0.5kb downstream 500 false scaffold02500: 662843-663342 Cucumis sativus
Cucsa.271900 1.0kb upstream 1.0kb upstream 6060 true scaffold02500: 656783-662842 Cucumis sativus
Cucsa.271900 1.0kb upstream 1.0kb upstream 1000 false scaffold02500: 656783-657782 Cucumis sativus
Cucsa.271900 1.0kb downstream 1.0kb downstream 6060 true scaffold02500: 657783-663842 Cucumis sativus
Cucsa.271900 1.0kb downstream 1.0kb downstream 1000 false scaffold02500: 662843-663842 Cucumis sativus
Cucsa.271900 2.0kb upstream 2.0kb upstream 7060 true scaffold02500: 655783-662842 Cucumis sativus
Cucsa.271900 2.0kb upstream 2.0kb upstream 2000 false scaffold02500: 655783-657782 Cucumis sativus
Cucsa.271900 2.0kb downstream 2.0kb downstream 7060 true scaffold02500: 657783-664842 Cucumis sativus
Cucsa.271900 2.0kb downstream 2.0kb downstream 2000 false scaffold02500: 662843-664842 Cucumis sativus
Cucsa.271900 5.0kb upstream 5.0kb upstream 10060 true scaffold02500: 652783-662842 Cucumis sativus
Cucsa.271900 5.0kb upstream 5.0kb upstream 5000 false scaffold02500: 652783-657782 Cucumis sativus
Cucsa.271900 5.0kb downstream 5.0kb downstream 10060 true scaffold02500: 657783-667842 Cucumis sativus
Cucsa.271900 5.0kb downstream 5.0kb downstream 5000 false scaffold02500: 662843-667842 Cucumis sativus
Cucsa.271900 10.0kb upstream 10.0kb upstream 15060 true scaffold02500: 647783-662842 Cucumis sativus
Cucsa.271900 10.0kb upstream 10.0kb upstream 10000 false scaffold02500: 647783-657782 Cucumis sativus
Cucsa.271900 10.0kb downstream 10.0kb downstream 15060 true scaffold02500: 657783-672842 Cucumis sativus
Cucsa.271900 10.0kb downstream 10.0kb downstream 10000 false scaffold02500: 662843-672842 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303124 5265 Fabidae View MSA
124067606 5270 Rosid View MSA
123751733 5271 Pentapetalae View MSA
122785800 5272 Eudicot View MSA
122050125 5273 Angiosperm View MSA
121348688 5274 Embryophyte View MSA
123427521 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain