Gene : Cucsa.271700 C. sativus v1.0
Defline:  (1 of 3) PTHR12378:SF12 - EXPRESSED PROTEIN Genomic Order:  67
Name:  ? Cucsa.271700 Secondary Identifier:  ? PAC:16973589
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.271700 0.5kb upstream 0.5kb upstream 3064 true scaffold02500: 516773-519836 Cucumis sativus
Cucsa.271700 0.5kb upstream 0.5kb upstream 500 false scaffold02500: 516773-517272 Cucumis sativus
Cucsa.271700 0.5kb downstream 0.5kb downstream 3064 true scaffold02500: 517273-520336 Cucumis sativus
Cucsa.271700 0.5kb downstream 0.5kb downstream 500 false scaffold02500: 519837-520336 Cucumis sativus
Cucsa.271700 1.0kb upstream 1.0kb upstream 3564 true scaffold02500: 516273-519836 Cucumis sativus
Cucsa.271700 1.0kb upstream 1.0kb upstream 1000 false scaffold02500: 516273-517272 Cucumis sativus
Cucsa.271700 1.0kb downstream 1.0kb downstream 3564 true scaffold02500: 517273-520836 Cucumis sativus
Cucsa.271700 1.0kb downstream 1.0kb downstream 1000 false scaffold02500: 519837-520836 Cucumis sativus
Cucsa.271700 2.0kb upstream 2.0kb upstream 4564 true scaffold02500: 515273-519836 Cucumis sativus
Cucsa.271700 2.0kb upstream 2.0kb upstream 2000 false scaffold02500: 515273-517272 Cucumis sativus
Cucsa.271700 2.0kb downstream 2.0kb downstream 4564 true scaffold02500: 517273-521836 Cucumis sativus
Cucsa.271700 2.0kb downstream 2.0kb downstream 2000 false scaffold02500: 519837-521836 Cucumis sativus
Cucsa.271700 5.0kb upstream 5.0kb upstream 7564 true scaffold02500: 512273-519836 Cucumis sativus
Cucsa.271700 5.0kb upstream 5.0kb upstream 5000 false scaffold02500: 512273-517272 Cucumis sativus
Cucsa.271700 5.0kb downstream 5.0kb downstream 7564 true scaffold02500: 517273-524836 Cucumis sativus
Cucsa.271700 5.0kb downstream 5.0kb downstream 5000 false scaffold02500: 519837-524836 Cucumis sativus
Cucsa.271700 10.0kb upstream 10.0kb upstream 12564 true scaffold02500: 507273-519836 Cucumis sativus
Cucsa.271700 10.0kb upstream 10.0kb upstream 10000 false scaffold02500: 507273-517272 Cucumis sativus
Cucsa.271700 10.0kb downstream 10.0kb downstream 12564 true scaffold02500: 517273-529836 Cucumis sativus
Cucsa.271700 10.0kb downstream 10.0kb downstream 10000 false scaffold02500: 519837-529836 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311568 5265 Fabidae View MSA
124064389 5270 Rosid View MSA
123748371 5271 Pentapetalae View MSA
122790696 5272 Eudicot View MSA
122047997 5273 Angiosperm View MSA
123429049 5275 Viridiplantae View MSA
121350542 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain