Gene : Cucsa.271420 C. sativus v1.0
Defline:  (1 of 1) PTHR11592:SF11 - PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE 1, CHLOROPLASTIC-RELATED Genomic Order:  39
Name:  ? Cucsa.271420 Secondary Identifier:  ? PAC:16973524
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-4081 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.271420 0.5kb upstream 0.5kb upstream 3559 true scaffold02500: 294378-297936 Cucumis sativus
Cucsa.271420 0.5kb upstream 0.5kb upstream 500 false scaffold02500: 297437-297936 Cucumis sativus
Cucsa.271420 0.5kb downstream 0.5kb downstream 3559 true scaffold02500: 293878-297436 Cucumis sativus
Cucsa.271420 0.5kb downstream 0.5kb downstream 500 false scaffold02500: 293878-294377 Cucumis sativus
Cucsa.271420 1.0kb upstream 1.0kb upstream 4059 true scaffold02500: 294378-298436 Cucumis sativus
Cucsa.271420 1.0kb upstream 1.0kb upstream 1000 false scaffold02500: 297437-298436 Cucumis sativus
Cucsa.271420 1.0kb downstream 1.0kb downstream 4059 true scaffold02500: 293378-297436 Cucumis sativus
Cucsa.271420 1.0kb downstream 1.0kb downstream 1000 false scaffold02500: 293378-294377 Cucumis sativus
Cucsa.271420 2.0kb upstream 2.0kb upstream 5059 true scaffold02500: 294378-299436 Cucumis sativus
Cucsa.271420 2.0kb upstream 2.0kb upstream 2000 false scaffold02500: 297437-299436 Cucumis sativus
Cucsa.271420 2.0kb downstream 2.0kb downstream 5059 true scaffold02500: 292378-297436 Cucumis sativus
Cucsa.271420 2.0kb downstream 2.0kb downstream 2000 false scaffold02500: 292378-294377 Cucumis sativus
Cucsa.271420 5.0kb upstream 5.0kb upstream 8059 true scaffold02500: 294378-302436 Cucumis sativus
Cucsa.271420 5.0kb upstream 5.0kb upstream 5000 false scaffold02500: 297437-302436 Cucumis sativus
Cucsa.271420 5.0kb downstream 5.0kb downstream 8059 true scaffold02500: 289378-297436 Cucumis sativus
Cucsa.271420 5.0kb downstream 5.0kb downstream 5000 false scaffold02500: 289378-294377 Cucumis sativus
Cucsa.271420 10.0kb upstream 10.0kb upstream 13059 true scaffold02500: 294378-307436 Cucumis sativus
Cucsa.271420 10.0kb upstream 10.0kb upstream 10000 false scaffold02500: 297437-307436 Cucumis sativus
Cucsa.271420 10.0kb downstream 10.0kb downstream 13059 true scaffold02500: 284378-297436 Cucumis sativus
Cucsa.271420 10.0kb downstream 10.0kb downstream 10000 false scaffold02500: 284378-294377 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306864 5265 Fabidae View MSA
124063282 5270 Rosid View MSA
123740898 5271 Pentapetalae View MSA
122792011 5272 Eudicot View MSA
122046042 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain