Gene : Cucsa.007280 C. sativus v1.0
Defline:  (1 of 21) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  14
Name:  ? Cucsa.007280 Secondary Identifier:  ? PAC:16951219
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.007280 0.5kb upstream 0.5kb upstream 6105 true scaffold00089: 150341-156445 Cucumis sativus
Cucsa.007280 0.5kb upstream 0.5kb upstream 500 false scaffold00089: 150341-150840 Cucumis sativus
Cucsa.007280 0.5kb downstream 0.5kb downstream 6105 true scaffold00089: 150841-156945 Cucumis sativus
Cucsa.007280 0.5kb downstream 0.5kb downstream 500 false scaffold00089: 156446-156945 Cucumis sativus
Cucsa.007280 1.0kb upstream 1.0kb upstream 6605 true scaffold00089: 149841-156445 Cucumis sativus
Cucsa.007280 1.0kb upstream 1.0kb upstream 1000 false scaffold00089: 149841-150840 Cucumis sativus
Cucsa.007280 1.0kb downstream 1.0kb downstream 6605 true scaffold00089: 150841-157445 Cucumis sativus
Cucsa.007280 1.0kb downstream 1.0kb downstream 1000 false scaffold00089: 156446-157445 Cucumis sativus
Cucsa.007280 2.0kb upstream 2.0kb upstream 7605 true scaffold00089: 148841-156445 Cucumis sativus
Cucsa.007280 2.0kb upstream 2.0kb upstream 2000 false scaffold00089: 148841-150840 Cucumis sativus
Cucsa.007280 2.0kb downstream 2.0kb downstream 7605 true scaffold00089: 150841-158445 Cucumis sativus
Cucsa.007280 2.0kb downstream 2.0kb downstream 2000 false scaffold00089: 156446-158445 Cucumis sativus
Cucsa.007280 5.0kb upstream 5.0kb upstream 10605 true scaffold00089: 145841-156445 Cucumis sativus
Cucsa.007280 5.0kb upstream 5.0kb upstream 5000 false scaffold00089: 145841-150840 Cucumis sativus
Cucsa.007280 5.0kb downstream 5.0kb downstream 10605 true scaffold00089: 150841-161445 Cucumis sativus
Cucsa.007280 5.0kb downstream 5.0kb downstream 5000 false scaffold00089: 156446-161445 Cucumis sativus
Cucsa.007280 10.0kb upstream 10.0kb upstream 15605 true scaffold00089: 140841-156445 Cucumis sativus
Cucsa.007280 10.0kb upstream 10.0kb upstream 10000 false scaffold00089: 140841-150840 Cucumis sativus
Cucsa.007280 10.0kb downstream 10.0kb downstream 15605 true scaffold00089: 150841-166445 Cucumis sativus
Cucsa.007280 10.0kb downstream 10.0kb downstream 10000 false scaffold00089: 156446-166445 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606386 5273 Angiosperm View MSA
122236656 5265 Fabidae View MSA
123982866 5270 Rosid View MSA
123558540 5271 Pentapetalae View MSA
122593354 5272 Eudicot View MSA
120878676 5274 Embryophyte View MSA
122919565 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain