Gene : Cucsa.007180 C. sativus v1.0
Defline:  (1 of 1) PTHR13312 - HIV-INDUCED PROTEIN-7-LIKE PROTEASE Genomic Order:  4
Name:  ? Cucsa.007180 Secondary Identifier:  ? PAC:16951208
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.007180 0.5kb upstream 0.5kb upstream 2619 true scaffold00089: 45715-48333 Cucumis sativus
Cucsa.007180 0.5kb upstream 0.5kb upstream 500 false scaffold00089: 47834-48333 Cucumis sativus
Cucsa.007180 0.5kb downstream 0.5kb downstream 2619 true scaffold00089: 45215-47833 Cucumis sativus
Cucsa.007180 0.5kb downstream 0.5kb downstream 500 false scaffold00089: 45215-45714 Cucumis sativus
Cucsa.007180 1.0kb upstream 1.0kb upstream 3119 true scaffold00089: 45715-48833 Cucumis sativus
Cucsa.007180 1.0kb upstream 1.0kb upstream 1000 false scaffold00089: 47834-48833 Cucumis sativus
Cucsa.007180 1.0kb downstream 1.0kb downstream 3119 true scaffold00089: 44715-47833 Cucumis sativus
Cucsa.007180 1.0kb downstream 1.0kb downstream 1000 false scaffold00089: 44715-45714 Cucumis sativus
Cucsa.007180 2.0kb upstream 2.0kb upstream 4119 true scaffold00089: 45715-49833 Cucumis sativus
Cucsa.007180 2.0kb upstream 2.0kb upstream 2000 false scaffold00089: 47834-49833 Cucumis sativus
Cucsa.007180 2.0kb downstream 2.0kb downstream 4119 true scaffold00089: 43715-47833 Cucumis sativus
Cucsa.007180 2.0kb downstream 2.0kb downstream 2000 false scaffold00089: 43715-45714 Cucumis sativus
Cucsa.007180 5.0kb upstream 5.0kb upstream 7119 true scaffold00089: 45715-52833 Cucumis sativus
Cucsa.007180 5.0kb upstream 5.0kb upstream 5000 false scaffold00089: 47834-52833 Cucumis sativus
Cucsa.007180 5.0kb downstream 5.0kb downstream 7119 true scaffold00089: 40715-47833 Cucumis sativus
Cucsa.007180 5.0kb downstream 5.0kb downstream 5000 false scaffold00089: 40715-45714 Cucumis sativus
Cucsa.007180 10.0kb upstream 10.0kb upstream 12119 true scaffold00089: 45715-57833 Cucumis sativus
Cucsa.007180 10.0kb upstream 10.0kb upstream 10000 false scaffold00089: 47834-57833 Cucumis sativus
Cucsa.007180 10.0kb downstream 10.0kb downstream 12119 true scaffold00089: 35715-47833 Cucumis sativus
Cucsa.007180 10.0kb downstream 10.0kb downstream 10000 false scaffold00089: 35715-45714 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300649 5265 Fabidae View MSA
124061628 5270 Rosid View MSA
123738549 5271 Pentapetalae View MSA
122788500 5272 Eudicot View MSA
122046032 5273 Angiosperm View MSA
121345268 5274 Embryophyte View MSA
123424822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain