Gene : Cucsa.271240 C. sativus v1.0
Defline:  (1 of 1) PTHR22763:SF50 - E3 UBIQUITIN-PROTEIN LIGASE AIP2 Genomic Order:  21
Name:  ? Cucsa.271240 Secondary Identifier:  ? PAC:16973503
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.271240 0.5kb upstream 0.5kb upstream 2778 true scaffold02500: 142520-145297 Cucumis sativus
Cucsa.271240 0.5kb upstream 0.5kb upstream 500 false scaffold02500: 144798-145297 Cucumis sativus
Cucsa.271240 0.5kb downstream 0.5kb downstream 2778 true scaffold02500: 142020-144797 Cucumis sativus
Cucsa.271240 0.5kb downstream 0.5kb downstream 500 false scaffold02500: 142020-142519 Cucumis sativus
Cucsa.271240 1.0kb upstream 1.0kb upstream 3278 true scaffold02500: 142520-145797 Cucumis sativus
Cucsa.271240 1.0kb upstream 1.0kb upstream 1000 false scaffold02500: 144798-145797 Cucumis sativus
Cucsa.271240 1.0kb downstream 1.0kb downstream 3278 true scaffold02500: 141520-144797 Cucumis sativus
Cucsa.271240 1.0kb downstream 1.0kb downstream 1000 false scaffold02500: 141520-142519 Cucumis sativus
Cucsa.271240 2.0kb upstream 2.0kb upstream 4278 true scaffold02500: 142520-146797 Cucumis sativus
Cucsa.271240 2.0kb upstream 2.0kb upstream 2000 false scaffold02500: 144798-146797 Cucumis sativus
Cucsa.271240 2.0kb downstream 2.0kb downstream 4278 true scaffold02500: 140520-144797 Cucumis sativus
Cucsa.271240 2.0kb downstream 2.0kb downstream 2000 false scaffold02500: 140520-142519 Cucumis sativus
Cucsa.271240 5.0kb upstream 5.0kb upstream 7278 true scaffold02500: 142520-149797 Cucumis sativus
Cucsa.271240 5.0kb upstream 5.0kb upstream 5000 false scaffold02500: 144798-149797 Cucumis sativus
Cucsa.271240 5.0kb downstream 5.0kb downstream 7278 true scaffold02500: 137520-144797 Cucumis sativus
Cucsa.271240 5.0kb downstream 5.0kb downstream 5000 false scaffold02500: 137520-142519 Cucumis sativus
Cucsa.271240 10.0kb upstream 10.0kb upstream 12278 true scaffold02500: 142520-154797 Cucumis sativus
Cucsa.271240 10.0kb upstream 10.0kb upstream 10000 false scaffold02500: 144798-154797 Cucumis sativus
Cucsa.271240 10.0kb downstream 10.0kb downstream 12278 true scaffold02500: 132520-144797 Cucumis sativus
Cucsa.271240 10.0kb downstream 10.0kb downstream 10000 false scaffold02500: 132520-142519 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
122312230 5265 Fabidae View MSA
124060743 5270 Rosid View MSA
123738156 5271 Pentapetalae View MSA
122787757 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain