Gene : Cucsa.007370 C. sativus v1.0
Defline:  (1 of 85) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  24
Name:  ? Cucsa.007370 Secondary Identifier:  ? PAC:16951231
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.007370 0.5kb upstream 0.5kb upstream 1152 true scaffold00089: 294877-296028 Cucumis sativus
Cucsa.007370 0.5kb upstream 0.5kb upstream 500 false scaffold00089: 295529-296028 Cucumis sativus
Cucsa.007370 0.5kb downstream 0.5kb downstream 1152 true scaffold00089: 294377-295528 Cucumis sativus
Cucsa.007370 0.5kb downstream 0.5kb downstream 500 false scaffold00089: 294377-294876 Cucumis sativus
Cucsa.007370 1.0kb upstream 1.0kb upstream 1652 true scaffold00089: 294877-296528 Cucumis sativus
Cucsa.007370 1.0kb upstream 1.0kb upstream 1000 false scaffold00089: 295529-296528 Cucumis sativus
Cucsa.007370 1.0kb downstream 1.0kb downstream 1652 true scaffold00089: 293877-295528 Cucumis sativus
Cucsa.007370 1.0kb downstream 1.0kb downstream 1000 false scaffold00089: 293877-294876 Cucumis sativus
Cucsa.007370 2.0kb upstream 2.0kb upstream 2652 true scaffold00089: 294877-297528 Cucumis sativus
Cucsa.007370 2.0kb upstream 2.0kb upstream 2000 false scaffold00089: 295529-297528 Cucumis sativus
Cucsa.007370 2.0kb downstream 2.0kb downstream 2652 true scaffold00089: 292877-295528 Cucumis sativus
Cucsa.007370 2.0kb downstream 2.0kb downstream 2000 false scaffold00089: 292877-294876 Cucumis sativus
Cucsa.007370 5.0kb upstream 5.0kb upstream 5652 true scaffold00089: 294877-300528 Cucumis sativus
Cucsa.007370 5.0kb upstream 5.0kb upstream 5000 false scaffold00089: 295529-300528 Cucumis sativus
Cucsa.007370 5.0kb downstream 5.0kb downstream 5652 true scaffold00089: 289877-295528 Cucumis sativus
Cucsa.007370 5.0kb downstream 5.0kb downstream 5000 false scaffold00089: 289877-294876 Cucumis sativus
Cucsa.007370 10.0kb upstream 10.0kb upstream 10652 true scaffold00089: 294877-305528 Cucumis sativus
Cucsa.007370 10.0kb upstream 10.0kb upstream 10000 false scaffold00089: 295529-305528 Cucumis sativus
Cucsa.007370 10.0kb downstream 10.0kb downstream 10652 true scaffold00089: 284877-295528 Cucumis sativus
Cucsa.007370 10.0kb downstream 10.0kb downstream 10000 false scaffold00089: 284877-294876 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029855 5273 Angiosperm View MSA
122315290 5265 Fabidae View MSA
124038140 5270 Rosid View MSA
123753008 5271 Pentapetalae View MSA
122774914 5272 Eudicot View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain