Gene : Cucsa.009280 C. sativus v1.0
Defline:  (1 of 41) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  18
Name:  ? Cucsa.009280 Secondary Identifier:  ? PAC:16951281
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.009280 0.5kb upstream 0.5kb upstream 1319 true scaffold00123: 283869-285187 Cucumis sativus
Cucsa.009280 0.5kb upstream 0.5kb upstream 500 false scaffold00123: 283869-284368 Cucumis sativus
Cucsa.009280 0.5kb downstream 0.5kb downstream 1319 true scaffold00123: 284369-285687 Cucumis sativus
Cucsa.009280 0.5kb downstream 0.5kb downstream 500 false scaffold00123: 285188-285687 Cucumis sativus
Cucsa.009280 1.0kb upstream 1.0kb upstream 1819 true scaffold00123: 283369-285187 Cucumis sativus
Cucsa.009280 1.0kb upstream 1.0kb upstream 1000 false scaffold00123: 283369-284368 Cucumis sativus
Cucsa.009280 1.0kb downstream 1.0kb downstream 1819 true scaffold00123: 284369-286187 Cucumis sativus
Cucsa.009280 1.0kb downstream 1.0kb downstream 1000 false scaffold00123: 285188-286187 Cucumis sativus
Cucsa.009280 2.0kb upstream 2.0kb upstream 2819 true scaffold00123: 282369-285187 Cucumis sativus
Cucsa.009280 2.0kb upstream 2.0kb upstream 2000 false scaffold00123: 282369-284368 Cucumis sativus
Cucsa.009280 2.0kb downstream 2.0kb downstream 2819 true scaffold00123: 284369-287187 Cucumis sativus
Cucsa.009280 2.0kb downstream 2.0kb downstream 2000 false scaffold00123: 285188-287187 Cucumis sativus
Cucsa.009280 5.0kb upstream 5.0kb upstream 5819 true scaffold00123: 279369-285187 Cucumis sativus
Cucsa.009280 5.0kb upstream 5.0kb upstream 5000 false scaffold00123: 279369-284368 Cucumis sativus
Cucsa.009280 5.0kb downstream 5.0kb downstream 5819 true scaffold00123: 284369-290187 Cucumis sativus
Cucsa.009280 5.0kb downstream 5.0kb downstream 5000 false scaffold00123: 285188-290187 Cucumis sativus
Cucsa.009280 10.0kb upstream 10.0kb upstream 10819 true scaffold00123: 274369-285187 Cucumis sativus
Cucsa.009280 10.0kb upstream 10.0kb upstream 10000 false scaffold00123: 274369-284368 Cucumis sativus
Cucsa.009280 10.0kb downstream 10.0kb downstream 10819 true scaffold00123: 284369-295187 Cucumis sativus
Cucsa.009280 10.0kb downstream 10.0kb downstream 10000 false scaffold00123: 285188-295187 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314980 5265 Fabidae View MSA
124074728 5270 Rosid View MSA
123752132 5271 Pentapetalae View MSA
122796960 5272 Eudicot View MSA
122046763 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain