Gene : Cucsa.009340 C. sativus v1.0
Defline:  (1 of 41) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  24
Name:  ? Cucsa.009340 Secondary Identifier:  ? PAC:16951287
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.009340 0.5kb upstream 0.5kb upstream 1462 true scaffold00123: 342276-343737 Cucumis sativus
Cucsa.009340 0.5kb upstream 0.5kb upstream 500 false scaffold00123: 343238-343737 Cucumis sativus
Cucsa.009340 0.5kb downstream 0.5kb downstream 1462 true scaffold00123: 341776-343237 Cucumis sativus
Cucsa.009340 0.5kb downstream 0.5kb downstream 500 false scaffold00123: 341776-342275 Cucumis sativus
Cucsa.009340 1.0kb upstream 1.0kb upstream 1962 true scaffold00123: 342276-344237 Cucumis sativus
Cucsa.009340 1.0kb upstream 1.0kb upstream 1000 false scaffold00123: 343238-344237 Cucumis sativus
Cucsa.009340 1.0kb downstream 1.0kb downstream 1962 true scaffold00123: 341276-343237 Cucumis sativus
Cucsa.009340 1.0kb downstream 1.0kb downstream 1000 false scaffold00123: 341276-342275 Cucumis sativus
Cucsa.009340 2.0kb upstream 2.0kb upstream 2962 true scaffold00123: 342276-345237 Cucumis sativus
Cucsa.009340 2.0kb upstream 2.0kb upstream 2000 false scaffold00123: 343238-345237 Cucumis sativus
Cucsa.009340 2.0kb downstream 2.0kb downstream 2962 true scaffold00123: 340276-343237 Cucumis sativus
Cucsa.009340 2.0kb downstream 2.0kb downstream 2000 false scaffold00123: 340276-342275 Cucumis sativus
Cucsa.009340 5.0kb upstream 5.0kb upstream 5962 true scaffold00123: 342276-348237 Cucumis sativus
Cucsa.009340 5.0kb upstream 5.0kb upstream 5000 false scaffold00123: 343238-348237 Cucumis sativus
Cucsa.009340 5.0kb downstream 5.0kb downstream 5962 true scaffold00123: 337276-343237 Cucumis sativus
Cucsa.009340 5.0kb downstream 5.0kb downstream 5000 false scaffold00123: 337276-342275 Cucumis sativus
Cucsa.009340 10.0kb upstream 10.0kb upstream 10962 true scaffold00123: 342276-353237 Cucumis sativus
Cucsa.009340 10.0kb upstream 10.0kb upstream 10000 false scaffold00123: 343238-353237 Cucumis sativus
Cucsa.009340 10.0kb downstream 10.0kb downstream 10962 true scaffold00123: 332276-343237 Cucumis sativus
Cucsa.009340 10.0kb downstream 10.0kb downstream 10000 false scaffold00123: 332276-342275 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314980 5265 Fabidae View MSA
124074728 5270 Rosid View MSA
123752132 5271 Pentapetalae View MSA
122796960 5272 Eudicot View MSA
122046763 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain