Gene : Cucsa.181940 C. sativus v1.0
Defline:  (1 of 2) PF05755 - Rubber elongation factor protein (REF) (REF) Genomic Order:  27
Name:  ? Cucsa.181940 Secondary Identifier:  ? PAC:16967453
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.181940 0.5kb upstream 0.5kb upstream 2223 true scaffold01251: 133281-135503 Cucumis sativus
Cucsa.181940 0.5kb upstream 0.5kb upstream 500 false scaffold01251: 135004-135503 Cucumis sativus
Cucsa.181940 0.5kb downstream 0.5kb downstream 2223 true scaffold01251: 132781-135003 Cucumis sativus
Cucsa.181940 0.5kb downstream 0.5kb downstream 500 false scaffold01251: 132781-133280 Cucumis sativus
Cucsa.181940 1.0kb upstream 1.0kb upstream 2723 true scaffold01251: 133281-136003 Cucumis sativus
Cucsa.181940 1.0kb upstream 1.0kb upstream 1000 false scaffold01251: 135004-136003 Cucumis sativus
Cucsa.181940 1.0kb downstream 1.0kb downstream 2723 true scaffold01251: 132281-135003 Cucumis sativus
Cucsa.181940 1.0kb downstream 1.0kb downstream 1000 false scaffold01251: 132281-133280 Cucumis sativus
Cucsa.181940 2.0kb upstream 2.0kb upstream 3723 true scaffold01251: 133281-137003 Cucumis sativus
Cucsa.181940 2.0kb upstream 2.0kb upstream 2000 false scaffold01251: 135004-137003 Cucumis sativus
Cucsa.181940 2.0kb downstream 2.0kb downstream 3723 true scaffold01251: 131281-135003 Cucumis sativus
Cucsa.181940 2.0kb downstream 2.0kb downstream 2000 false scaffold01251: 131281-133280 Cucumis sativus
Cucsa.181940 5.0kb upstream 5.0kb upstream 6723 true scaffold01251: 133281-140003 Cucumis sativus
Cucsa.181940 5.0kb upstream 5.0kb upstream 5000 false scaffold01251: 135004-140003 Cucumis sativus
Cucsa.181940 5.0kb downstream 5.0kb downstream 6723 true scaffold01251: 128281-135003 Cucumis sativus
Cucsa.181940 5.0kb downstream 5.0kb downstream 5000 false scaffold01251: 128281-133280 Cucumis sativus
Cucsa.181940 10.0kb upstream 10.0kb upstream 11723 true scaffold01251: 133281-145003 Cucumis sativus
Cucsa.181940 10.0kb upstream 10.0kb upstream 10000 false scaffold01251: 135004-145003 Cucumis sativus
Cucsa.181940 10.0kb downstream 10.0kb downstream 11723 true scaffold01251: 123281-135003 Cucumis sativus
Cucsa.181940 10.0kb downstream 10.0kb downstream 10000 false scaffold01251: 123281-133280 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314163 5265 Fabidae View MSA
124071747 5270 Rosid View MSA
123747287 5271 Pentapetalae View MSA
122790209 5272 Eudicot View MSA
122043264 5273 Angiosperm View MSA
121343982 5274 Embryophyte View MSA
123379951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain