Gene : Cucsa.178930 C. sativus v1.0
Defline:  (1 of 1) PTHR13301//PTHR13301:SF28 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  85
Name:  ? Cucsa.178930 Secondary Identifier:  ? PAC:16967179
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1001 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.178930 0.5kb upstream 0.5kb upstream 5102 true scaffold01227: 1334246-1339347 Cucumis sativus
Cucsa.178930 0.5kb upstream 0.5kb upstream 500 false scaffold01227: 1338848-1339347 Cucumis sativus
Cucsa.178930 0.5kb downstream 0.5kb downstream 5102 true scaffold01227: 1333746-1338847 Cucumis sativus
Cucsa.178930 0.5kb downstream 0.5kb downstream 500 false scaffold01227: 1333746-1334245 Cucumis sativus
Cucsa.178930 1.0kb upstream 1.0kb upstream 5602 true scaffold01227: 1334246-1339847 Cucumis sativus
Cucsa.178930 1.0kb upstream 1.0kb upstream 1000 false scaffold01227: 1338848-1339847 Cucumis sativus
Cucsa.178930 1.0kb downstream 1.0kb downstream 5602 true scaffold01227: 1333246-1338847 Cucumis sativus
Cucsa.178930 1.0kb downstream 1.0kb downstream 1000 false scaffold01227: 1333246-1334245 Cucumis sativus
Cucsa.178930 2.0kb upstream 2.0kb upstream 6602 true scaffold01227: 1334246-1340847 Cucumis sativus
Cucsa.178930 2.0kb upstream 2.0kb upstream 2000 false scaffold01227: 1338848-1340847 Cucumis sativus
Cucsa.178930 2.0kb downstream 2.0kb downstream 6602 true scaffold01227: 1332246-1338847 Cucumis sativus
Cucsa.178930 2.0kb downstream 2.0kb downstream 2000 false scaffold01227: 1332246-1334245 Cucumis sativus
Cucsa.178930 5.0kb upstream 5.0kb upstream 9602 true scaffold01227: 1334246-1343847 Cucumis sativus
Cucsa.178930 5.0kb upstream 5.0kb upstream 5000 false scaffold01227: 1338848-1343847 Cucumis sativus
Cucsa.178930 5.0kb downstream 5.0kb downstream 9602 true scaffold01227: 1329246-1338847 Cucumis sativus
Cucsa.178930 5.0kb downstream 5.0kb downstream 5000 false scaffold01227: 1329246-1334245 Cucumis sativus
Cucsa.178930 10.0kb upstream 10.0kb upstream 14602 true scaffold01227: 1334246-1348847 Cucumis sativus
Cucsa.178930 10.0kb upstream 10.0kb upstream 10000 false scaffold01227: 1338848-1348847 Cucumis sativus
Cucsa.178930 10.0kb downstream 10.0kb downstream 14602 true scaffold01227: 1324246-1338847 Cucumis sativus
Cucsa.178930 10.0kb downstream 10.0kb downstream 10000 false scaffold01227: 1324246-1334245 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299706 5265 Fabidae View MSA
124065342 5270 Rosid View MSA
123753627 5271 Pentapetalae View MSA
122788990 5272 Eudicot View MSA
122047016 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain