Gene : Cucsa.178170 C. sativus v1.0
Defline:  (1 of 1) PTHR34549:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED Genomic Order:  9
Name:  ? Cucsa.178170 Secondary Identifier:  ? PAC:16967062
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.178170 0.5kb upstream 0.5kb upstream 1624 true scaffold01227: 158767-160390 Cucumis sativus
Cucsa.178170 0.5kb upstream 0.5kb upstream 500 false scaffold01227: 158767-159266 Cucumis sativus
Cucsa.178170 0.5kb downstream 0.5kb downstream 1624 true scaffold01227: 159267-160890 Cucumis sativus
Cucsa.178170 0.5kb downstream 0.5kb downstream 500 false scaffold01227: 160391-160890 Cucumis sativus
Cucsa.178170 1.0kb upstream 1.0kb upstream 2124 true scaffold01227: 158267-160390 Cucumis sativus
Cucsa.178170 1.0kb upstream 1.0kb upstream 1000 false scaffold01227: 158267-159266 Cucumis sativus
Cucsa.178170 1.0kb downstream 1.0kb downstream 2124 true scaffold01227: 159267-161390 Cucumis sativus
Cucsa.178170 1.0kb downstream 1.0kb downstream 1000 false scaffold01227: 160391-161390 Cucumis sativus
Cucsa.178170 2.0kb upstream 2.0kb upstream 3124 true scaffold01227: 157267-160390 Cucumis sativus
Cucsa.178170 2.0kb upstream 2.0kb upstream 2000 false scaffold01227: 157267-159266 Cucumis sativus
Cucsa.178170 2.0kb downstream 2.0kb downstream 3124 true scaffold01227: 159267-162390 Cucumis sativus
Cucsa.178170 2.0kb downstream 2.0kb downstream 2000 false scaffold01227: 160391-162390 Cucumis sativus
Cucsa.178170 5.0kb upstream 5.0kb upstream 6124 true scaffold01227: 154267-160390 Cucumis sativus
Cucsa.178170 5.0kb upstream 5.0kb upstream 5000 false scaffold01227: 154267-159266 Cucumis sativus
Cucsa.178170 5.0kb downstream 5.0kb downstream 6124 true scaffold01227: 159267-165390 Cucumis sativus
Cucsa.178170 5.0kb downstream 5.0kb downstream 5000 false scaffold01227: 160391-165390 Cucumis sativus
Cucsa.178170 10.0kb upstream 10.0kb upstream 11124 true scaffold01227: 149267-160390 Cucumis sativus
Cucsa.178170 10.0kb upstream 10.0kb upstream 10000 false scaffold01227: 149267-159266 Cucumis sativus
Cucsa.178170 10.0kb downstream 10.0kb downstream 11124 true scaffold01227: 159267-170390 Cucumis sativus
Cucsa.178170 10.0kb downstream 10.0kb downstream 10000 false scaffold01227: 160391-170390 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304273 5265 Fabidae View MSA
124068589 5270 Rosid View MSA
123747276 5271 Pentapetalae View MSA
122791001 5272 Eudicot View MSA
122047877 5273 Angiosperm View MSA
121348572 5274 Embryophyte View MSA
123426677 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain