Gene : Cucsa.178180 C. sativus v1.0
Defline:  (1 of 1) 3.1.26.12 - Ribonuclease E / RNase E Genomic Order:  10
Name:  ? Cucsa.178180 Secondary Identifier:  ? PAC:16967063
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.178180 0.5kb upstream 0.5kb upstream 7614 true scaffold01227: 168056-175669 Cucumis sativus
Cucsa.178180 0.5kb upstream 0.5kb upstream 500 false scaffold01227: 168056-168555 Cucumis sativus
Cucsa.178180 0.5kb downstream 0.5kb downstream 7614 true scaffold01227: 168556-176169 Cucumis sativus
Cucsa.178180 0.5kb downstream 0.5kb downstream 500 false scaffold01227: 175670-176169 Cucumis sativus
Cucsa.178180 1.0kb upstream 1.0kb upstream 8114 true scaffold01227: 167556-175669 Cucumis sativus
Cucsa.178180 1.0kb upstream 1.0kb upstream 1000 false scaffold01227: 167556-168555 Cucumis sativus
Cucsa.178180 1.0kb downstream 1.0kb downstream 8114 true scaffold01227: 168556-176669 Cucumis sativus
Cucsa.178180 1.0kb downstream 1.0kb downstream 1000 false scaffold01227: 175670-176669 Cucumis sativus
Cucsa.178180 2.0kb upstream 2.0kb upstream 9114 true scaffold01227: 166556-175669 Cucumis sativus
Cucsa.178180 2.0kb upstream 2.0kb upstream 2000 false scaffold01227: 166556-168555 Cucumis sativus
Cucsa.178180 2.0kb downstream 2.0kb downstream 9114 true scaffold01227: 168556-177669 Cucumis sativus
Cucsa.178180 2.0kb downstream 2.0kb downstream 2000 false scaffold01227: 175670-177669 Cucumis sativus
Cucsa.178180 5.0kb upstream 5.0kb upstream 12114 true scaffold01227: 163556-175669 Cucumis sativus
Cucsa.178180 5.0kb upstream 5.0kb upstream 5000 false scaffold01227: 163556-168555 Cucumis sativus
Cucsa.178180 5.0kb downstream 5.0kb downstream 12114 true scaffold01227: 168556-180669 Cucumis sativus
Cucsa.178180 5.0kb downstream 5.0kb downstream 5000 false scaffold01227: 175670-180669 Cucumis sativus
Cucsa.178180 10.0kb upstream 10.0kb upstream 17114 true scaffold01227: 158556-175669 Cucumis sativus
Cucsa.178180 10.0kb upstream 10.0kb upstream 10000 false scaffold01227: 158556-168555 Cucumis sativus
Cucsa.178180 10.0kb downstream 10.0kb downstream 17114 true scaffold01227: 168556-185669 Cucumis sativus
Cucsa.178180 10.0kb downstream 10.0kb downstream 10000 false scaffold01227: 175670-185669 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305766 5265 Fabidae View MSA
124068993 5270 Rosid View MSA
123738651 5271 Pentapetalae View MSA
122790207 5272 Eudicot View MSA
122044812 5273 Angiosperm View MSA
121350131 5274 Embryophyte View MSA
123426847 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain