Gene : Cucsa.176790 C. sativus v1.0
Defline:  (1 of 2) PTHR10108//PTHR10108:SF885 - METHYLTRANSFERASE Genomic Order:  154
Name:  ? Cucsa.176790 Secondary Identifier:  ? PAC:16966933
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.176790 0.5kb upstream 0.5kb upstream 1748 true scaffold01225: 878488-880235 Cucumis sativus
Cucsa.176790 0.5kb upstream 0.5kb upstream 500 false scaffold01225: 878488-878987 Cucumis sativus
Cucsa.176790 0.5kb downstream 0.5kb downstream 1748 true scaffold01225: 878988-880735 Cucumis sativus
Cucsa.176790 0.5kb downstream 0.5kb downstream 500 false scaffold01225: 880236-880735 Cucumis sativus
Cucsa.176790 1.0kb upstream 1.0kb upstream 2248 true scaffold01225: 877988-880235 Cucumis sativus
Cucsa.176790 1.0kb upstream 1.0kb upstream 1000 false scaffold01225: 877988-878987 Cucumis sativus
Cucsa.176790 1.0kb downstream 1.0kb downstream 2248 true scaffold01225: 878988-881235 Cucumis sativus
Cucsa.176790 1.0kb downstream 1.0kb downstream 1000 false scaffold01225: 880236-881235 Cucumis sativus
Cucsa.176790 2.0kb upstream 2.0kb upstream 3248 true scaffold01225: 876988-880235 Cucumis sativus
Cucsa.176790 2.0kb upstream 2.0kb upstream 2000 false scaffold01225: 876988-878987 Cucumis sativus
Cucsa.176790 2.0kb downstream 2.0kb downstream 3248 true scaffold01225: 878988-882235 Cucumis sativus
Cucsa.176790 2.0kb downstream 2.0kb downstream 2000 false scaffold01225: 880236-882235 Cucumis sativus
Cucsa.176790 5.0kb upstream 5.0kb upstream 6248 true scaffold01225: 873988-880235 Cucumis sativus
Cucsa.176790 5.0kb upstream 5.0kb upstream 5000 false scaffold01225: 873988-878987 Cucumis sativus
Cucsa.176790 5.0kb downstream 5.0kb downstream 6248 true scaffold01225: 878988-885235 Cucumis sativus
Cucsa.176790 5.0kb downstream 5.0kb downstream 5000 false scaffold01225: 880236-885235 Cucumis sativus
Cucsa.176790 10.0kb upstream 10.0kb upstream 11248 true scaffold01225: 868988-880235 Cucumis sativus
Cucsa.176790 10.0kb upstream 10.0kb upstream 10000 false scaffold01225: 868988-878987 Cucumis sativus
Cucsa.176790 10.0kb downstream 10.0kb downstream 11248 true scaffold01225: 878988-890235 Cucumis sativus
Cucsa.176790 10.0kb downstream 10.0kb downstream 10000 false scaffold01225: 880236-890235 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121603737 5273 Angiosperm Singleton cluster - no MSA
122233986 5265 Fabidae Singleton cluster - no MSA
123980212 5270 Rosid Singleton cluster - no MSA
123555889 5271 Pentapetalae Singleton cluster - no MSA
122590703 5272 Eudicot Singleton cluster - no MSA
120876027 5274 Embryophyte Singleton cluster - no MSA
122916918 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain