Gene : Cucsa.176290 C. sativus v1.0
Defline:  (1 of 1) PTHR10357//PTHR10357:SF149 - ALPHA-AMYLASE Genomic Order:  105
Name:  ? Cucsa.176290 Secondary Identifier:  ? PAC:16966867
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6724 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.176290 0.5kb upstream 0.5kb upstream 3477 true scaffold01225: 603013-606489 Cucumis sativus
Cucsa.176290 0.5kb upstream 0.5kb upstream 500 false scaffold01225: 603013-603512 Cucumis sativus
Cucsa.176290 0.5kb downstream 0.5kb downstream 3477 true scaffold01225: 603513-606989 Cucumis sativus
Cucsa.176290 0.5kb downstream 0.5kb downstream 500 false scaffold01225: 606490-606989 Cucumis sativus
Cucsa.176290 1.0kb upstream 1.0kb upstream 3977 true scaffold01225: 602513-606489 Cucumis sativus
Cucsa.176290 1.0kb upstream 1.0kb upstream 1000 false scaffold01225: 602513-603512 Cucumis sativus
Cucsa.176290 1.0kb downstream 1.0kb downstream 3977 true scaffold01225: 603513-607489 Cucumis sativus
Cucsa.176290 1.0kb downstream 1.0kb downstream 1000 false scaffold01225: 606490-607489 Cucumis sativus
Cucsa.176290 2.0kb upstream 2.0kb upstream 4977 true scaffold01225: 601513-606489 Cucumis sativus
Cucsa.176290 2.0kb upstream 2.0kb upstream 2000 false scaffold01225: 601513-603512 Cucumis sativus
Cucsa.176290 2.0kb downstream 2.0kb downstream 4977 true scaffold01225: 603513-608489 Cucumis sativus
Cucsa.176290 2.0kb downstream 2.0kb downstream 2000 false scaffold01225: 606490-608489 Cucumis sativus
Cucsa.176290 5.0kb upstream 5.0kb upstream 7977 true scaffold01225: 598513-606489 Cucumis sativus
Cucsa.176290 5.0kb upstream 5.0kb upstream 5000 false scaffold01225: 598513-603512 Cucumis sativus
Cucsa.176290 5.0kb downstream 5.0kb downstream 7977 true scaffold01225: 603513-611489 Cucumis sativus
Cucsa.176290 5.0kb downstream 5.0kb downstream 5000 false scaffold01225: 606490-611489 Cucumis sativus
Cucsa.176290 10.0kb upstream 10.0kb upstream 12977 true scaffold01225: 593513-606489 Cucumis sativus
Cucsa.176290 10.0kb upstream 10.0kb upstream 10000 false scaffold01225: 593513-603512 Cucumis sativus
Cucsa.176290 10.0kb downstream 10.0kb downstream 12977 true scaffold01225: 603513-616489 Cucumis sativus
Cucsa.176290 10.0kb downstream 10.0kb downstream 10000 false scaffold01225: 606490-616489 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309854 5265 Fabidae View MSA
124066457 5270 Rosid View MSA
123740444 5271 Pentapetalae View MSA
122787837 5272 Eudicot View MSA
122047143 5273 Angiosperm View MSA
123429164 5275 Viridiplantae View MSA
121348122 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain