Gene : Cucsa.176340 C. sativus v1.0
Defline:  (1 of 3) PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Genomic Order:  110
Name:  ? Cucsa.176340 Secondary Identifier:  ? PAC:16966877
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.176340 0.5kb upstream 0.5kb upstream 5226 true scaffold01225: 633128-638353 Cucumis sativus
Cucsa.176340 0.5kb upstream 0.5kb upstream 500 false scaffold01225: 637854-638353 Cucumis sativus
Cucsa.176340 0.5kb downstream 0.5kb downstream 5226 true scaffold01225: 632628-637853 Cucumis sativus
Cucsa.176340 0.5kb downstream 0.5kb downstream 500 false scaffold01225: 632628-633127 Cucumis sativus
Cucsa.176340 1.0kb upstream 1.0kb upstream 5726 true scaffold01225: 633128-638853 Cucumis sativus
Cucsa.176340 1.0kb upstream 1.0kb upstream 1000 false scaffold01225: 637854-638853 Cucumis sativus
Cucsa.176340 1.0kb downstream 1.0kb downstream 5726 true scaffold01225: 632128-637853 Cucumis sativus
Cucsa.176340 1.0kb downstream 1.0kb downstream 1000 false scaffold01225: 632128-633127 Cucumis sativus
Cucsa.176340 2.0kb upstream 2.0kb upstream 6726 true scaffold01225: 633128-639853 Cucumis sativus
Cucsa.176340 2.0kb upstream 2.0kb upstream 2000 false scaffold01225: 637854-639853 Cucumis sativus
Cucsa.176340 2.0kb downstream 2.0kb downstream 6726 true scaffold01225: 631128-637853 Cucumis sativus
Cucsa.176340 2.0kb downstream 2.0kb downstream 2000 false scaffold01225: 631128-633127 Cucumis sativus
Cucsa.176340 5.0kb upstream 5.0kb upstream 9726 true scaffold01225: 633128-642853 Cucumis sativus
Cucsa.176340 5.0kb upstream 5.0kb upstream 5000 false scaffold01225: 637854-642853 Cucumis sativus
Cucsa.176340 5.0kb downstream 5.0kb downstream 9726 true scaffold01225: 628128-637853 Cucumis sativus
Cucsa.176340 5.0kb downstream 5.0kb downstream 5000 false scaffold01225: 628128-633127 Cucumis sativus
Cucsa.176340 10.0kb upstream 10.0kb upstream 14726 true scaffold01225: 633128-647853 Cucumis sativus
Cucsa.176340 10.0kb upstream 10.0kb upstream 10000 false scaffold01225: 637854-647853 Cucumis sativus
Cucsa.176340 10.0kb downstream 10.0kb downstream 14726 true scaffold01225: 623128-637853 Cucumis sativus
Cucsa.176340 10.0kb downstream 10.0kb downstream 10000 false scaffold01225: 623128-633127 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121603730 5273 Angiosperm Singleton cluster - no MSA
122233979 5265 Fabidae Singleton cluster - no MSA
123980205 5270 Rosid Singleton cluster - no MSA
123555882 5271 Pentapetalae Singleton cluster - no MSA
122590696 5272 Eudicot Singleton cluster - no MSA
120876020 5274 Embryophyte Singleton cluster - no MSA
122916911 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain