Gene : Cucsa.184280 C. sativus v1.0
Defline:  (1 of 2) PTHR11592:SF17 - GLUTATHIONE PEROXIDASE 4-RELATED Genomic Order:  4
Name:  ? Cucsa.184280 Secondary Identifier:  ? PAC:16967537
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus DETOX1-PWY-1 Cucumis sativus pathologic  
Csativus PWY-4081 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.184280 0.5kb upstream 0.5kb upstream 3567 true scaffold01274: 25845-29411 Cucumis sativus
Cucsa.184280 0.5kb upstream 0.5kb upstream 500 false scaffold01274: 25845-26344 Cucumis sativus
Cucsa.184280 0.5kb downstream 0.5kb downstream 3567 true scaffold01274: 26345-29911 Cucumis sativus
Cucsa.184280 0.5kb downstream 0.5kb downstream 500 false scaffold01274: 29412-29911 Cucumis sativus
Cucsa.184280 1.0kb upstream 1.0kb upstream 4067 true scaffold01274: 25345-29411 Cucumis sativus
Cucsa.184280 1.0kb upstream 1.0kb upstream 1000 false scaffold01274: 25345-26344 Cucumis sativus
Cucsa.184280 1.0kb downstream 1.0kb downstream 4067 true scaffold01274: 26345-30411 Cucumis sativus
Cucsa.184280 1.0kb downstream 1.0kb downstream 1000 false scaffold01274: 29412-30411 Cucumis sativus
Cucsa.184280 2.0kb upstream 2.0kb upstream 5067 true scaffold01274: 24345-29411 Cucumis sativus
Cucsa.184280 2.0kb upstream 2.0kb upstream 2000 false scaffold01274: 24345-26344 Cucumis sativus
Cucsa.184280 2.0kb downstream 2.0kb downstream 5067 true scaffold01274: 26345-31411 Cucumis sativus
Cucsa.184280 2.0kb downstream 2.0kb downstream 2000 false scaffold01274: 29412-31411 Cucumis sativus
Cucsa.184280 5.0kb upstream 5.0kb upstream 8067 true scaffold01274: 21345-29411 Cucumis sativus
Cucsa.184280 5.0kb upstream 5.0kb upstream 5000 false scaffold01274: 21345-26344 Cucumis sativus
Cucsa.184280 5.0kb downstream 5.0kb downstream 8067 true scaffold01274: 26345-34411 Cucumis sativus
Cucsa.184280 5.0kb downstream 5.0kb downstream 5000 false scaffold01274: 29412-34411 Cucumis sativus
Cucsa.184280 10.0kb upstream 10.0kb upstream 13067 true scaffold01274: 16345-29411 Cucumis sativus
Cucsa.184280 10.0kb upstream 10.0kb upstream 10000 false scaffold01274: 16345-26344 Cucumis sativus
Cucsa.184280 10.0kb downstream 10.0kb downstream 13067 true scaffold01274: 26345-39411 Cucumis sativus
Cucsa.184280 10.0kb downstream 10.0kb downstream 10000 false scaffold01274: 29412-39411 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026200 5273 Angiosperm View MSA
122303343 5265 Fabidae View MSA
124065058 5270 Rosid View MSA
123743608 5271 Pentapetalae View MSA
122796492 5272 Eudicot View MSA
121296225 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain