Gene : Cucsa.169950 C. sativus v1.0
Defline:  (1 of 5) PTHR19446:SF340 - REVERSE TRANSCRIPTASE-RELATED Genomic Order:  13
Name:  ? Cucsa.169950 Secondary Identifier:  ? PAC:16966432
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.169950 0.5kb upstream 0.5kb upstream 2413 true scaffold01174: 179275-181687 Cucumis sativus
Cucsa.169950 0.5kb upstream 0.5kb upstream 500 false scaffold01174: 181188-181687 Cucumis sativus
Cucsa.169950 0.5kb downstream 0.5kb downstream 2413 true scaffold01174: 178775-181187 Cucumis sativus
Cucsa.169950 0.5kb downstream 0.5kb downstream 500 false scaffold01174: 178775-179274 Cucumis sativus
Cucsa.169950 1.0kb upstream 1.0kb upstream 2913 true scaffold01174: 179275-182187 Cucumis sativus
Cucsa.169950 1.0kb upstream 1.0kb upstream 1000 false scaffold01174: 181188-182187 Cucumis sativus
Cucsa.169950 1.0kb downstream 1.0kb downstream 2913 true scaffold01174: 178275-181187 Cucumis sativus
Cucsa.169950 1.0kb downstream 1.0kb downstream 1000 false scaffold01174: 178275-179274 Cucumis sativus
Cucsa.169950 2.0kb upstream 2.0kb upstream 3913 true scaffold01174: 179275-183187 Cucumis sativus
Cucsa.169950 2.0kb upstream 2.0kb upstream 2000 false scaffold01174: 181188-183187 Cucumis sativus
Cucsa.169950 2.0kb downstream 2.0kb downstream 3913 true scaffold01174: 177275-181187 Cucumis sativus
Cucsa.169950 2.0kb downstream 2.0kb downstream 2000 false scaffold01174: 177275-179274 Cucumis sativus
Cucsa.169950 5.0kb upstream 5.0kb upstream 6913 true scaffold01174: 179275-186187 Cucumis sativus
Cucsa.169950 5.0kb upstream 5.0kb upstream 5000 false scaffold01174: 181188-186187 Cucumis sativus
Cucsa.169950 5.0kb downstream 5.0kb downstream 6913 true scaffold01174: 174275-181187 Cucumis sativus
Cucsa.169950 5.0kb downstream 5.0kb downstream 5000 false scaffold01174: 174275-179274 Cucumis sativus
Cucsa.169950 10.0kb upstream 10.0kb upstream 11913 true scaffold01174: 179275-191187 Cucumis sativus
Cucsa.169950 10.0kb upstream 10.0kb upstream 10000 false scaffold01174: 181188-191187 Cucumis sativus
Cucsa.169950 10.0kb downstream 10.0kb downstream 11913 true scaffold01174: 169275-181187 Cucumis sativus
Cucsa.169950 10.0kb downstream 10.0kb downstream 10000 false scaffold01174: 169275-179274 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315345 5265 Fabidae View MSA
124074258 5270 Rosid View MSA
123753554 5271 Pentapetalae View MSA
122797941 5272 Eudicot View MSA
122051690 5273 Angiosperm View MSA
121351675 5274 Embryophyte View MSA
123428354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain