Gene : Cucsa.072580 C. sativus v1.0
Defline:  (1 of 10) PTHR13301:SF53 - CELLULOSE SYNTHASE-LIKE PROTEIN B1-RELATED Genomic Order:  3
Name:  ? Cucsa.072580 Secondary Identifier:  ? PAC:16955506
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1001 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.072580 0.5kb upstream 0.5kb upstream 8751 true scaffold00765: 13631-22381 Cucumis sativus
Cucsa.072580 0.5kb upstream 0.5kb upstream 500 false scaffold00765: 21882-22381 Cucumis sativus
Cucsa.072580 0.5kb downstream 0.5kb downstream 8751 true scaffold00765: 13131-21881 Cucumis sativus
Cucsa.072580 0.5kb downstream 0.5kb downstream 500 false scaffold00765: 13131-13630 Cucumis sativus
Cucsa.072580 1.0kb upstream 1.0kb upstream 9251 true scaffold00765: 13631-22881 Cucumis sativus
Cucsa.072580 1.0kb upstream 1.0kb upstream 1000 false scaffold00765: 21882-22881 Cucumis sativus
Cucsa.072580 1.0kb downstream 1.0kb downstream 9251 true scaffold00765: 12631-21881 Cucumis sativus
Cucsa.072580 1.0kb downstream 1.0kb downstream 1000 false scaffold00765: 12631-13630 Cucumis sativus
Cucsa.072580 2.0kb upstream 2.0kb upstream 10251 true scaffold00765: 13631-23881 Cucumis sativus
Cucsa.072580 2.0kb upstream 2.0kb upstream 2000 false scaffold00765: 21882-23881 Cucumis sativus
Cucsa.072580 2.0kb downstream 2.0kb downstream 10251 true scaffold00765: 11631-21881 Cucumis sativus
Cucsa.072580 2.0kb downstream 2.0kb downstream 2000 false scaffold00765: 11631-13630 Cucumis sativus
Cucsa.072580 5.0kb upstream 5.0kb upstream 13251 true scaffold00765: 13631-26881 Cucumis sativus
Cucsa.072580 5.0kb upstream 5.0kb upstream 5000 false scaffold00765: 21882-26881 Cucumis sativus
Cucsa.072580 5.0kb downstream 5.0kb downstream 13251 true scaffold00765: 8631-21881 Cucumis sativus
Cucsa.072580 5.0kb downstream 5.0kb downstream 5000 false scaffold00765: 8631-13630 Cucumis sativus
Cucsa.072580 10.0kb upstream 10.0kb upstream 18251 true scaffold00765: 13631-31881 Cucumis sativus
Cucsa.072580 10.0kb upstream 10.0kb upstream 10000 false scaffold00765: 21882-31881 Cucumis sativus
Cucsa.072580 10.0kb downstream 10.0kb downstream 18251 true scaffold00765: 3631-21881 Cucumis sativus
Cucsa.072580 10.0kb downstream 10.0kb downstream 10000 false scaffold00765: 3631-13630 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315720 5265 Fabidae View MSA
124075544 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain