Gene : Cucsa.038840 C. sativus v1.0
Defline:  (1 of 26) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  8
Name:  ? Cucsa.038840 Secondary Identifier:  ? PAC:16952743
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.038840 0.5kb upstream 0.5kb upstream 1231 true scaffold00508: 95908-97138 Cucumis sativus
Cucsa.038840 0.5kb upstream 0.5kb upstream 500 false scaffold00508: 95908-96407 Cucumis sativus
Cucsa.038840 0.5kb downstream 0.5kb downstream 1231 true scaffold00508: 96408-97638 Cucumis sativus
Cucsa.038840 0.5kb downstream 0.5kb downstream 500 false scaffold00508: 97139-97638 Cucumis sativus
Cucsa.038840 1.0kb upstream 1.0kb upstream 1731 true scaffold00508: 95408-97138 Cucumis sativus
Cucsa.038840 1.0kb upstream 1.0kb upstream 1000 false scaffold00508: 95408-96407 Cucumis sativus
Cucsa.038840 1.0kb downstream 1.0kb downstream 1731 true scaffold00508: 96408-98138 Cucumis sativus
Cucsa.038840 1.0kb downstream 1.0kb downstream 1000 false scaffold00508: 97139-98138 Cucumis sativus
Cucsa.038840 2.0kb upstream 2.0kb upstream 2731 true scaffold00508: 94408-97138 Cucumis sativus
Cucsa.038840 2.0kb upstream 2.0kb upstream 2000 false scaffold00508: 94408-96407 Cucumis sativus
Cucsa.038840 2.0kb downstream 2.0kb downstream 2731 true scaffold00508: 96408-99138 Cucumis sativus
Cucsa.038840 2.0kb downstream 2.0kb downstream 2000 false scaffold00508: 97139-99138 Cucumis sativus
Cucsa.038840 5.0kb upstream 5.0kb upstream 5731 true scaffold00508: 91408-97138 Cucumis sativus
Cucsa.038840 5.0kb upstream 5.0kb upstream 5000 false scaffold00508: 91408-96407 Cucumis sativus
Cucsa.038840 5.0kb downstream 5.0kb downstream 5731 true scaffold00508: 96408-102138 Cucumis sativus
Cucsa.038840 5.0kb downstream 5.0kb downstream 5000 false scaffold00508: 97139-102138 Cucumis sativus
Cucsa.038840 10.0kb upstream 10.0kb upstream 10731 true scaffold00508: 86408-97138 Cucumis sativus
Cucsa.038840 10.0kb upstream 10.0kb upstream 10000 false scaffold00508: 86408-96407 Cucumis sativus
Cucsa.038840 10.0kb downstream 10.0kb downstream 10731 true scaffold00508: 96408-107138 Cucumis sativus
Cucsa.038840 10.0kb downstream 10.0kb downstream 10000 false scaffold00508: 97139-107138 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305688 5265 Fabidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain