Gene : Cucsa.017470 C. sativus v1.0
Defline:  (1 of 1) PTHR24096:SF169 - 4-COUMARATE--COA LIGASE 3 Genomic Order:  22
Name:  ? Cucsa.017470 Secondary Identifier:  ? PAC:16951728
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1121 Cucumis sativus pathologic  
Csativus PWY1F-FLAVSYN Cucumis sativus pathologic  
Csativus PWY-361 Cucumis sativus pathologic  
Csativus PWY-6435 Cucumis sativus pathologic  
Csativus PWY-6673 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.017470 0.5kb upstream 0.5kb upstream 5282 true scaffold00245: 185774-191055 Cucumis sativus
Cucsa.017470 0.5kb upstream 0.5kb upstream 500 false scaffold00245: 190556-191055 Cucumis sativus
Cucsa.017470 0.5kb downstream 0.5kb downstream 5282 true scaffold00245: 185274-190555 Cucumis sativus
Cucsa.017470 0.5kb downstream 0.5kb downstream 500 false scaffold00245: 185274-185773 Cucumis sativus
Cucsa.017470 1.0kb upstream 1.0kb upstream 5782 true scaffold00245: 185774-191555 Cucumis sativus
Cucsa.017470 1.0kb upstream 1.0kb upstream 1000 false scaffold00245: 190556-191555 Cucumis sativus
Cucsa.017470 1.0kb downstream 1.0kb downstream 5782 true scaffold00245: 184774-190555 Cucumis sativus
Cucsa.017470 1.0kb downstream 1.0kb downstream 1000 false scaffold00245: 184774-185773 Cucumis sativus
Cucsa.017470 2.0kb upstream 2.0kb upstream 6782 true scaffold00245: 185774-192555 Cucumis sativus
Cucsa.017470 2.0kb upstream 2.0kb upstream 2000 false scaffold00245: 190556-192555 Cucumis sativus
Cucsa.017470 2.0kb downstream 2.0kb downstream 6782 true scaffold00245: 183774-190555 Cucumis sativus
Cucsa.017470 2.0kb downstream 2.0kb downstream 2000 false scaffold00245: 183774-185773 Cucumis sativus
Cucsa.017470 5.0kb upstream 5.0kb upstream 9782 true scaffold00245: 185774-195555 Cucumis sativus
Cucsa.017470 5.0kb upstream 5.0kb upstream 5000 false scaffold00245: 190556-195555 Cucumis sativus
Cucsa.017470 5.0kb downstream 5.0kb downstream 9782 true scaffold00245: 180774-190555 Cucumis sativus
Cucsa.017470 5.0kb downstream 5.0kb downstream 5000 false scaffold00245: 180774-185773 Cucumis sativus
Cucsa.017470 10.0kb upstream 10.0kb upstream 14782 true scaffold00245: 185774-200555 Cucumis sativus
Cucsa.017470 10.0kb upstream 10.0kb upstream 10000 false scaffold00245: 190556-200555 Cucumis sativus
Cucsa.017470 10.0kb downstream 10.0kb downstream 14782 true scaffold00245: 175774-190555 Cucumis sativus
Cucsa.017470 10.0kb downstream 10.0kb downstream 10000 false scaffold00245: 175774-185773 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312448 5265 Fabidae View MSA
124063529 5270 Rosid View MSA
123738118 5271 Pentapetalae View MSA
122792374 5272 Eudicot View MSA
122048251 5273 Angiosperm View MSA
121345883 5274 Embryophyte View MSA
123380283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain