Gene : Cucsa.018360 C. sativus v1.0
Defline:  (1 of 2) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE Genomic Order:  54
Name:  ? Cucsa.018360 Secondary Identifier:  ? PAC:16951822
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.018360 0.5kb upstream 0.5kb upstream 1823 true scaffold00252: 777696-779518 Cucumis sativus
Cucsa.018360 0.5kb upstream 0.5kb upstream 500 false scaffold00252: 777696-778195 Cucumis sativus
Cucsa.018360 0.5kb downstream 0.5kb downstream 1823 true scaffold00252: 778196-780018 Cucumis sativus
Cucsa.018360 0.5kb downstream 0.5kb downstream 500 false scaffold00252: 779519-780018 Cucumis sativus
Cucsa.018360 1.0kb upstream 1.0kb upstream 2323 true scaffold00252: 777196-779518 Cucumis sativus
Cucsa.018360 1.0kb upstream 1.0kb upstream 1000 false scaffold00252: 777196-778195 Cucumis sativus
Cucsa.018360 1.0kb downstream 1.0kb downstream 2323 true scaffold00252: 778196-780518 Cucumis sativus
Cucsa.018360 1.0kb downstream 1.0kb downstream 1000 false scaffold00252: 779519-780518 Cucumis sativus
Cucsa.018360 2.0kb upstream 2.0kb upstream 3323 true scaffold00252: 776196-779518 Cucumis sativus
Cucsa.018360 2.0kb upstream 2.0kb upstream 2000 false scaffold00252: 776196-778195 Cucumis sativus
Cucsa.018360 2.0kb downstream 2.0kb downstream 3323 true scaffold00252: 778196-781518 Cucumis sativus
Cucsa.018360 2.0kb downstream 2.0kb downstream 2000 false scaffold00252: 779519-781518 Cucumis sativus
Cucsa.018360 5.0kb upstream 5.0kb upstream 6323 true scaffold00252: 773196-779518 Cucumis sativus
Cucsa.018360 5.0kb upstream 5.0kb upstream 5000 false scaffold00252: 773196-778195 Cucumis sativus
Cucsa.018360 5.0kb downstream 5.0kb downstream 6323 true scaffold00252: 778196-784518 Cucumis sativus
Cucsa.018360 5.0kb downstream 5.0kb downstream 5000 false scaffold00252: 779519-784518 Cucumis sativus
Cucsa.018360 10.0kb upstream 10.0kb upstream 11323 true scaffold00252: 768196-779518 Cucumis sativus
Cucsa.018360 10.0kb upstream 10.0kb upstream 10000 false scaffold00252: 768196-778195 Cucumis sativus
Cucsa.018360 10.0kb downstream 10.0kb downstream 11323 true scaffold00252: 778196-789518 Cucumis sativus
Cucsa.018360 10.0kb downstream 10.0kb downstream 10000 false scaffold00252: 779519-789518 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305000 5265 Fabidae View MSA
124068304 5270 Rosid View MSA
123739380 5271 Pentapetalae View MSA
122792095 5272 Eudicot View MSA
122045794 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain