Gene : Cucsa.357520 C. sativus v1.0
Defline:  (1 of 1) PTHR14969 - SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE Genomic Order:  33
Name:  ? Cucsa.357520 Secondary Identifier:  ? PAC:16980422
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRIGLSYN-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.357520 0.5kb upstream 0.5kb upstream 6246 true scaffold03578: 638859-645104 Cucumis sativus
Cucsa.357520 0.5kb upstream 0.5kb upstream 500 false scaffold03578: 644605-645104 Cucumis sativus
Cucsa.357520 0.5kb downstream 0.5kb downstream 6246 true scaffold03578: 638359-644604 Cucumis sativus
Cucsa.357520 0.5kb downstream 0.5kb downstream 500 false scaffold03578: 638359-638858 Cucumis sativus
Cucsa.357520 1.0kb upstream 1.0kb upstream 6746 true scaffold03578: 638859-645604 Cucumis sativus
Cucsa.357520 1.0kb upstream 1.0kb upstream 1000 false scaffold03578: 644605-645604 Cucumis sativus
Cucsa.357520 1.0kb downstream 1.0kb downstream 6746 true scaffold03578: 637859-644604 Cucumis sativus
Cucsa.357520 1.0kb downstream 1.0kb downstream 1000 false scaffold03578: 637859-638858 Cucumis sativus
Cucsa.357520 2.0kb upstream 2.0kb upstream 7746 true scaffold03578: 638859-646604 Cucumis sativus
Cucsa.357520 2.0kb upstream 2.0kb upstream 2000 false scaffold03578: 644605-646604 Cucumis sativus
Cucsa.357520 2.0kb downstream 2.0kb downstream 7746 true scaffold03578: 636859-644604 Cucumis sativus
Cucsa.357520 2.0kb downstream 2.0kb downstream 2000 false scaffold03578: 636859-638858 Cucumis sativus
Cucsa.357520 5.0kb upstream 5.0kb upstream 10746 true scaffold03578: 638859-649604 Cucumis sativus
Cucsa.357520 5.0kb upstream 5.0kb upstream 5000 false scaffold03578: 644605-649604 Cucumis sativus
Cucsa.357520 5.0kb downstream 5.0kb downstream 10746 true scaffold03578: 633859-644604 Cucumis sativus
Cucsa.357520 5.0kb downstream 5.0kb downstream 5000 false scaffold03578: 633859-638858 Cucumis sativus
Cucsa.357520 10.0kb upstream 10.0kb upstream 15746 true scaffold03578: 638859-654604 Cucumis sativus
Cucsa.357520 10.0kb upstream 10.0kb upstream 10000 false scaffold03578: 644605-654604 Cucumis sativus
Cucsa.357520 10.0kb downstream 10.0kb downstream 15746 true scaffold03578: 628859-644604 Cucumis sativus
Cucsa.357520 10.0kb downstream 10.0kb downstream 10000 false scaffold03578: 628859-638858 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309105 5265 Fabidae View MSA
124061101 5270 Rosid View MSA
123739708 5271 Pentapetalae View MSA
122787223 5272 Eudicot View MSA
122041787 5273 Angiosperm View MSA
121351488 5274 Embryophyte View MSA
123382186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain