Gene : Cucsa.027460 C. sativus v1.0
Defline:  (1 of 2) PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED Genomic Order:  15
Name:  ? Cucsa.027460 Secondary Identifier:  ? PAC:16952122
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.027460 0.5kb upstream 0.5kb upstream 4333 true scaffold00378: 210038-214370 Cucumis sativus
Cucsa.027460 0.5kb upstream 0.5kb upstream 500 false scaffold00378: 213871-214370 Cucumis sativus
Cucsa.027460 0.5kb downstream 0.5kb downstream 4333 true scaffold00378: 209538-213870 Cucumis sativus
Cucsa.027460 0.5kb downstream 0.5kb downstream 500 false scaffold00378: 209538-210037 Cucumis sativus
Cucsa.027460 1.0kb upstream 1.0kb upstream 4833 true scaffold00378: 210038-214870 Cucumis sativus
Cucsa.027460 1.0kb upstream 1.0kb upstream 1000 false scaffold00378: 213871-214870 Cucumis sativus
Cucsa.027460 1.0kb downstream 1.0kb downstream 4833 true scaffold00378: 209038-213870 Cucumis sativus
Cucsa.027460 1.0kb downstream 1.0kb downstream 1000 false scaffold00378: 209038-210037 Cucumis sativus
Cucsa.027460 2.0kb upstream 2.0kb upstream 5833 true scaffold00378: 210038-215870 Cucumis sativus
Cucsa.027460 2.0kb upstream 2.0kb upstream 2000 false scaffold00378: 213871-215870 Cucumis sativus
Cucsa.027460 2.0kb downstream 2.0kb downstream 5833 true scaffold00378: 208038-213870 Cucumis sativus
Cucsa.027460 2.0kb downstream 2.0kb downstream 2000 false scaffold00378: 208038-210037 Cucumis sativus
Cucsa.027460 5.0kb upstream 5.0kb upstream 8833 true scaffold00378: 210038-218870 Cucumis sativus
Cucsa.027460 5.0kb upstream 5.0kb upstream 5000 false scaffold00378: 213871-218870 Cucumis sativus
Cucsa.027460 5.0kb downstream 5.0kb downstream 8833 true scaffold00378: 205038-213870 Cucumis sativus
Cucsa.027460 5.0kb downstream 5.0kb downstream 5000 false scaffold00378: 205038-210037 Cucumis sativus
Cucsa.027460 10.0kb upstream 10.0kb upstream 13833 true scaffold00378: 210038-223870 Cucumis sativus
Cucsa.027460 10.0kb upstream 10.0kb upstream 10000 false scaffold00378: 213871-223870 Cucumis sativus
Cucsa.027460 10.0kb downstream 10.0kb downstream 13833 true scaffold00378: 200038-213870 Cucumis sativus
Cucsa.027460 10.0kb downstream 10.0kb downstream 10000 false scaffold00378: 200038-210037 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306184 5265 Fabidae View MSA
124062085 5270 Rosid View MSA
123746638 5271 Pentapetalae View MSA
122792580 5272 Eudicot View MSA
122047878 5273 Angiosperm View MSA
121349100 5274 Embryophyte View MSA
123426825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain