Gene : Cucsa.027770 C. sativus v1.0
Defline:  (1 of 1) PTHR21402:SF10 - U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 48 KDA PROTEIN Genomic Order:  45
Name:  ? Cucsa.027770 Secondary Identifier:  ? PAC:16952167
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.027770 0.5kb upstream 0.5kb upstream 5400 true scaffold00378: 607732-613131 Cucumis sativus
Cucsa.027770 0.5kb upstream 0.5kb upstream 500 false scaffold00378: 607732-608231 Cucumis sativus
Cucsa.027770 0.5kb downstream 0.5kb downstream 5400 true scaffold00378: 608232-613631 Cucumis sativus
Cucsa.027770 0.5kb downstream 0.5kb downstream 500 false scaffold00378: 613132-613631 Cucumis sativus
Cucsa.027770 1.0kb upstream 1.0kb upstream 5900 true scaffold00378: 607232-613131 Cucumis sativus
Cucsa.027770 1.0kb upstream 1.0kb upstream 1000 false scaffold00378: 607232-608231 Cucumis sativus
Cucsa.027770 1.0kb downstream 1.0kb downstream 5900 true scaffold00378: 608232-614131 Cucumis sativus
Cucsa.027770 1.0kb downstream 1.0kb downstream 1000 false scaffold00378: 613132-614131 Cucumis sativus
Cucsa.027770 2.0kb upstream 2.0kb upstream 6900 true scaffold00378: 606232-613131 Cucumis sativus
Cucsa.027770 2.0kb upstream 2.0kb upstream 2000 false scaffold00378: 606232-608231 Cucumis sativus
Cucsa.027770 2.0kb downstream 2.0kb downstream 6900 true scaffold00378: 608232-615131 Cucumis sativus
Cucsa.027770 2.0kb downstream 2.0kb downstream 2000 false scaffold00378: 613132-615131 Cucumis sativus
Cucsa.027770 5.0kb upstream 5.0kb upstream 9900 true scaffold00378: 603232-613131 Cucumis sativus
Cucsa.027770 5.0kb upstream 5.0kb upstream 5000 false scaffold00378: 603232-608231 Cucumis sativus
Cucsa.027770 5.0kb downstream 5.0kb downstream 9900 true scaffold00378: 608232-618131 Cucumis sativus
Cucsa.027770 5.0kb downstream 5.0kb downstream 5000 false scaffold00378: 613132-618131 Cucumis sativus
Cucsa.027770 10.0kb upstream 10.0kb upstream 14900 true scaffold00378: 598232-613131 Cucumis sativus
Cucsa.027770 10.0kb upstream 10.0kb upstream 10000 false scaffold00378: 598232-608231 Cucumis sativus
Cucsa.027770 10.0kb downstream 10.0kb downstream 14900 true scaffold00378: 608232-623131 Cucumis sativus
Cucsa.027770 10.0kb downstream 10.0kb downstream 10000 false scaffold00378: 613132-623131 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302931 5265 Fabidae View MSA
124063423 5270 Rosid View MSA
123740826 5271 Pentapetalae View MSA
122788385 5272 Eudicot View MSA
122044714 5273 Angiosperm View MSA
121344837 5274 Embryophyte View MSA
123380110 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain