Gene : Cucsa.031390 C. sativus v1.0
Defline:  (1 of 85) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  22
Name:  ? Cucsa.031390 Secondary Identifier:  ? PAC:16952294
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.031390 0.5kb upstream 0.5kb upstream 3432 true scaffold00429: 474966-478397 Cucumis sativus
Cucsa.031390 0.5kb upstream 0.5kb upstream 500 false scaffold00429: 474966-475465 Cucumis sativus
Cucsa.031390 0.5kb downstream 0.5kb downstream 3432 true scaffold00429: 475466-478897 Cucumis sativus
Cucsa.031390 0.5kb downstream 0.5kb downstream 500 false scaffold00429: 478398-478897 Cucumis sativus
Cucsa.031390 1.0kb upstream 1.0kb upstream 3932 true scaffold00429: 474466-478397 Cucumis sativus
Cucsa.031390 1.0kb upstream 1.0kb upstream 1000 false scaffold00429: 474466-475465 Cucumis sativus
Cucsa.031390 1.0kb downstream 1.0kb downstream 3932 true scaffold00429: 475466-479397 Cucumis sativus
Cucsa.031390 1.0kb downstream 1.0kb downstream 1000 false scaffold00429: 478398-479397 Cucumis sativus
Cucsa.031390 2.0kb upstream 2.0kb upstream 4932 true scaffold00429: 473466-478397 Cucumis sativus
Cucsa.031390 2.0kb upstream 2.0kb upstream 2000 false scaffold00429: 473466-475465 Cucumis sativus
Cucsa.031390 2.0kb downstream 2.0kb downstream 4932 true scaffold00429: 475466-480397 Cucumis sativus
Cucsa.031390 2.0kb downstream 2.0kb downstream 2000 false scaffold00429: 478398-480397 Cucumis sativus
Cucsa.031390 5.0kb upstream 5.0kb upstream 7932 true scaffold00429: 470466-478397 Cucumis sativus
Cucsa.031390 5.0kb upstream 5.0kb upstream 5000 false scaffold00429: 470466-475465 Cucumis sativus
Cucsa.031390 5.0kb downstream 5.0kb downstream 7932 true scaffold00429: 475466-483397 Cucumis sativus
Cucsa.031390 5.0kb downstream 5.0kb downstream 5000 false scaffold00429: 478398-483397 Cucumis sativus
Cucsa.031390 10.0kb upstream 10.0kb upstream 12932 true scaffold00429: 465466-478397 Cucumis sativus
Cucsa.031390 10.0kb upstream 10.0kb upstream 10000 false scaffold00429: 465466-475465 Cucumis sativus
Cucsa.031390 10.0kb downstream 10.0kb downstream 12932 true scaffold00429: 475466-488397 Cucumis sativus
Cucsa.031390 10.0kb downstream 10.0kb downstream 10000 false scaffold00429: 478398-488397 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121601699 5273 Angiosperm Singleton cluster - no MSA
122231932 5265 Fabidae Singleton cluster - no MSA
123978173 5270 Rosid Singleton cluster - no MSA
123553851 5271 Pentapetalae Singleton cluster - no MSA
122588665 5272 Eudicot Singleton cluster - no MSA
120873990 5274 Embryophyte Singleton cluster - no MSA
122914881 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain