Gene : Cucsa.031320 C. sativus v1.0
Defline:  (1 of 2) 5.3.99.9 - Neoxanthin synthase / NSY Genomic Order:  15
Name:  ? Cucsa.031320 Secondary Identifier:  ? PAC:16952286
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6809 Cucumis sativus pathologic  
Csativus PWY-695 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.031320 0.5kb upstream 0.5kb upstream 6775 true scaffold00429: 307399-314173 Cucumis sativus
Cucsa.031320 0.5kb upstream 0.5kb upstream 500 false scaffold00429: 313674-314173 Cucumis sativus
Cucsa.031320 0.5kb downstream 0.5kb downstream 6775 true scaffold00429: 306899-313673 Cucumis sativus
Cucsa.031320 0.5kb downstream 0.5kb downstream 500 false scaffold00429: 306899-307398 Cucumis sativus
Cucsa.031320 1.0kb upstream 1.0kb upstream 7275 true scaffold00429: 307399-314673 Cucumis sativus
Cucsa.031320 1.0kb upstream 1.0kb upstream 1000 false scaffold00429: 313674-314673 Cucumis sativus
Cucsa.031320 1.0kb downstream 1.0kb downstream 7275 true scaffold00429: 306399-313673 Cucumis sativus
Cucsa.031320 1.0kb downstream 1.0kb downstream 1000 false scaffold00429: 306399-307398 Cucumis sativus
Cucsa.031320 2.0kb upstream 2.0kb upstream 8275 true scaffold00429: 307399-315673 Cucumis sativus
Cucsa.031320 2.0kb upstream 2.0kb upstream 2000 false scaffold00429: 313674-315673 Cucumis sativus
Cucsa.031320 2.0kb downstream 2.0kb downstream 8275 true scaffold00429: 305399-313673 Cucumis sativus
Cucsa.031320 2.0kb downstream 2.0kb downstream 2000 false scaffold00429: 305399-307398 Cucumis sativus
Cucsa.031320 5.0kb upstream 5.0kb upstream 11275 true scaffold00429: 307399-318673 Cucumis sativus
Cucsa.031320 5.0kb upstream 5.0kb upstream 5000 false scaffold00429: 313674-318673 Cucumis sativus
Cucsa.031320 5.0kb downstream 5.0kb downstream 11275 true scaffold00429: 302399-313673 Cucumis sativus
Cucsa.031320 5.0kb downstream 5.0kb downstream 5000 false scaffold00429: 302399-307398 Cucumis sativus
Cucsa.031320 10.0kb upstream 10.0kb upstream 16275 true scaffold00429: 307399-323673 Cucumis sativus
Cucsa.031320 10.0kb upstream 10.0kb upstream 10000 false scaffold00429: 313674-323673 Cucumis sativus
Cucsa.031320 10.0kb downstream 10.0kb downstream 16275 true scaffold00429: 297399-313673 Cucumis sativus
Cucsa.031320 10.0kb downstream 10.0kb downstream 10000 false scaffold00429: 297399-307398 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312106 5265 Fabidae View MSA
124062178 5270 Rosid View MSA
123748588 5271 Pentapetalae View MSA
122790006 5272 Eudicot View MSA
122047205 5273 Angiosperm View MSA
121346000 5274 Embryophyte View MSA
123425892 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain