Gene : Cucsa.031940 C. sativus v1.0
Defline:  (1 of 2) PTHR24095:SF178 - ACETATE--COA LIGASE ACS, CHLOROPLASTIC/GLYOXYSOMAL Genomic Order:  76
Name:  ? Cucsa.031940 Secondary Identifier:  ? PAC:16952366
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY66-21 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.031940 0.5kb upstream 0.5kb upstream 15379 true scaffold00429: 1188349-1203727 Cucumis sativus
Cucsa.031940 0.5kb upstream 0.5kb upstream 500 false scaffold00429: 1203228-1203727 Cucumis sativus
Cucsa.031940 0.5kb downstream 0.5kb downstream 15379 true scaffold00429: 1187849-1203227 Cucumis sativus
Cucsa.031940 0.5kb downstream 0.5kb downstream 500 false scaffold00429: 1187849-1188348 Cucumis sativus
Cucsa.031940 1.0kb upstream 1.0kb upstream 15879 true scaffold00429: 1188349-1204227 Cucumis sativus
Cucsa.031940 1.0kb upstream 1.0kb upstream 1000 false scaffold00429: 1203228-1204227 Cucumis sativus
Cucsa.031940 1.0kb downstream 1.0kb downstream 15879 true scaffold00429: 1187349-1203227 Cucumis sativus
Cucsa.031940 1.0kb downstream 1.0kb downstream 1000 false scaffold00429: 1187349-1188348 Cucumis sativus
Cucsa.031940 2.0kb upstream 2.0kb upstream 16879 true scaffold00429: 1188349-1205227 Cucumis sativus
Cucsa.031940 2.0kb upstream 2.0kb upstream 2000 false scaffold00429: 1203228-1205227 Cucumis sativus
Cucsa.031940 2.0kb downstream 2.0kb downstream 16879 true scaffold00429: 1186349-1203227 Cucumis sativus
Cucsa.031940 2.0kb downstream 2.0kb downstream 2000 false scaffold00429: 1186349-1188348 Cucumis sativus
Cucsa.031940 5.0kb upstream 5.0kb upstream 19879 true scaffold00429: 1188349-1208227 Cucumis sativus
Cucsa.031940 5.0kb upstream 5.0kb upstream 5000 false scaffold00429: 1203228-1208227 Cucumis sativus
Cucsa.031940 5.0kb downstream 5.0kb downstream 19879 true scaffold00429: 1183349-1203227 Cucumis sativus
Cucsa.031940 5.0kb downstream 5.0kb downstream 5000 false scaffold00429: 1183349-1188348 Cucumis sativus
Cucsa.031940 10.0kb upstream 10.0kb upstream 24879 true scaffold00429: 1188349-1213227 Cucumis sativus
Cucsa.031940 10.0kb upstream 10.0kb upstream 10000 false scaffold00429: 1203228-1213227 Cucumis sativus
Cucsa.031940 10.0kb downstream 10.0kb downstream 24879 true scaffold00429: 1178349-1203227 Cucumis sativus
Cucsa.031940 10.0kb downstream 10.0kb downstream 10000 false scaffold00429: 1178349-1188348 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303292 5265 Fabidae View MSA
124065659 5270 Rosid View MSA
123746880 5271 Pentapetalae View MSA
122789146 5272 Eudicot View MSA
122041906 5273 Angiosperm View MSA
121351540 5274 Embryophyte View MSA
123424340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain