Gene : Cucsa.033680 C. sativus v1.0
Defline:  (1 of 2) PTHR11594 - 40S RIBOSOMAL PROTEIN S27 Genomic Order:  10
Name:  ? Cucsa.033680 Secondary Identifier:  ? PAC:16952557
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.033680 0.5kb upstream 0.5kb upstream 2086 true scaffold00438: 132336-134421 Cucumis sativus
Cucsa.033680 0.5kb upstream 0.5kb upstream 500 false scaffold00438: 132336-132835 Cucumis sativus
Cucsa.033680 0.5kb downstream 0.5kb downstream 2086 true scaffold00438: 132836-134921 Cucumis sativus
Cucsa.033680 0.5kb downstream 0.5kb downstream 500 false scaffold00438: 134422-134921 Cucumis sativus
Cucsa.033680 1.0kb upstream 1.0kb upstream 2586 true scaffold00438: 131836-134421 Cucumis sativus
Cucsa.033680 1.0kb upstream 1.0kb upstream 1000 false scaffold00438: 131836-132835 Cucumis sativus
Cucsa.033680 1.0kb downstream 1.0kb downstream 2586 true scaffold00438: 132836-135421 Cucumis sativus
Cucsa.033680 1.0kb downstream 1.0kb downstream 1000 false scaffold00438: 134422-135421 Cucumis sativus
Cucsa.033680 2.0kb upstream 2.0kb upstream 3586 true scaffold00438: 130836-134421 Cucumis sativus
Cucsa.033680 2.0kb upstream 2.0kb upstream 2000 false scaffold00438: 130836-132835 Cucumis sativus
Cucsa.033680 2.0kb downstream 2.0kb downstream 3586 true scaffold00438: 132836-136421 Cucumis sativus
Cucsa.033680 2.0kb downstream 2.0kb downstream 2000 false scaffold00438: 134422-136421 Cucumis sativus
Cucsa.033680 5.0kb upstream 5.0kb upstream 6586 true scaffold00438: 127836-134421 Cucumis sativus
Cucsa.033680 5.0kb upstream 5.0kb upstream 5000 false scaffold00438: 127836-132835 Cucumis sativus
Cucsa.033680 5.0kb downstream 5.0kb downstream 6586 true scaffold00438: 132836-139421 Cucumis sativus
Cucsa.033680 5.0kb downstream 5.0kb downstream 5000 false scaffold00438: 134422-139421 Cucumis sativus
Cucsa.033680 10.0kb upstream 10.0kb upstream 11586 true scaffold00438: 122836-134421 Cucumis sativus
Cucsa.033680 10.0kb upstream 10.0kb upstream 10000 false scaffold00438: 122836-132835 Cucumis sativus
Cucsa.033680 10.0kb downstream 10.0kb downstream 11586 true scaffold00438: 132836-144421 Cucumis sativus
Cucsa.033680 10.0kb downstream 10.0kb downstream 10000 false scaffold00438: 134422-144421 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041078 5273 Angiosperm View MSA
122314519 5265 Fabidae View MSA
124065866 5270 Rosid View MSA
123752077 5271 Pentapetalae View MSA
122796838 5272 Eudicot View MSA
121348120 5274 Embryophyte View MSA
123423805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain