Gene : Cucsa.034720 C. sativus v1.0
Defline:  (1 of 1) PTHR20852//PTHR20852:SF61 - GLUTAMINE SYNTHETASE Genomic Order:  35
Name:  ? Cucsa.034720 Secondary Identifier:  ? PAC:16952633
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLNSYN-PWY Cucumis sativus pathologic  
Csativus PWY-3282 Cucumis sativus pathologic  
Csativus PWY-381 Cucumis sativus pathologic  
Csativus PWY-6549 Cucumis sativus pathologic  
Csativus PWY-6963 Cucumis sativus pathologic  
Csativus PWY-6964 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.034720 0.5kb upstream 0.5kb upstream 3824 true scaffold00444: 605367-609190 Cucumis sativus
Cucsa.034720 0.5kb upstream 0.5kb upstream 500 false scaffold00444: 608691-609190 Cucumis sativus
Cucsa.034720 0.5kb downstream 0.5kb downstream 3824 true scaffold00444: 604867-608690 Cucumis sativus
Cucsa.034720 0.5kb downstream 0.5kb downstream 500 false scaffold00444: 604867-605366 Cucumis sativus
Cucsa.034720 1.0kb upstream 1.0kb upstream 4324 true scaffold00444: 605367-609690 Cucumis sativus
Cucsa.034720 1.0kb upstream 1.0kb upstream 1000 false scaffold00444: 608691-609690 Cucumis sativus
Cucsa.034720 1.0kb downstream 1.0kb downstream 4324 true scaffold00444: 604367-608690 Cucumis sativus
Cucsa.034720 1.0kb downstream 1.0kb downstream 1000 false scaffold00444: 604367-605366 Cucumis sativus
Cucsa.034720 2.0kb upstream 2.0kb upstream 5324 true scaffold00444: 605367-610690 Cucumis sativus
Cucsa.034720 2.0kb upstream 2.0kb upstream 2000 false scaffold00444: 608691-610690 Cucumis sativus
Cucsa.034720 2.0kb downstream 2.0kb downstream 5324 true scaffold00444: 603367-608690 Cucumis sativus
Cucsa.034720 2.0kb downstream 2.0kb downstream 2000 false scaffold00444: 603367-605366 Cucumis sativus
Cucsa.034720 5.0kb upstream 5.0kb upstream 8324 true scaffold00444: 605367-613690 Cucumis sativus
Cucsa.034720 5.0kb upstream 5.0kb upstream 5000 false scaffold00444: 608691-613690 Cucumis sativus
Cucsa.034720 5.0kb downstream 5.0kb downstream 8324 true scaffold00444: 600367-608690 Cucumis sativus
Cucsa.034720 5.0kb downstream 5.0kb downstream 5000 false scaffold00444: 600367-605366 Cucumis sativus
Cucsa.034720 10.0kb upstream 10.0kb upstream 13324 true scaffold00444: 605367-618690 Cucumis sativus
Cucsa.034720 10.0kb upstream 10.0kb upstream 10000 false scaffold00444: 608691-618690 Cucumis sativus
Cucsa.034720 10.0kb downstream 10.0kb downstream 13324 true scaffold00444: 595367-608690 Cucumis sativus
Cucsa.034720 10.0kb downstream 10.0kb downstream 10000 false scaffold00444: 595367-605366 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121601783 5273 Angiosperm Singleton cluster - no MSA
122232016 5265 Fabidae Singleton cluster - no MSA
123978257 5270 Rosid Singleton cluster - no MSA
123553935 5271 Pentapetalae Singleton cluster - no MSA
122588749 5272 Eudicot Singleton cluster - no MSA
120874074 5274 Embryophyte Singleton cluster - no MSA
122914965 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain