Gene : Cucsa.054220 C. sativus v1.0
Defline:  (1 of 2) 2.1.1.190 - 23S rRNA (uracil(1939)-C(5))-methyltransferase / RNA uridine methyltransferase A Genomic Order:  34
Name:  ? Cucsa.054220 Secondary Identifier:  ? PAC:16954399
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.054220 0.5kb upstream 0.5kb upstream 5051 true scaffold00582: 540125-545175 Cucumis sativus
Cucsa.054220 0.5kb upstream 0.5kb upstream 500 false scaffold00582: 544676-545175 Cucumis sativus
Cucsa.054220 0.5kb downstream 0.5kb downstream 5051 true scaffold00582: 539625-544675 Cucumis sativus
Cucsa.054220 0.5kb downstream 0.5kb downstream 500 false scaffold00582: 539625-540124 Cucumis sativus
Cucsa.054220 1.0kb upstream 1.0kb upstream 5551 true scaffold00582: 540125-545675 Cucumis sativus
Cucsa.054220 1.0kb upstream 1.0kb upstream 1000 false scaffold00582: 544676-545675 Cucumis sativus
Cucsa.054220 1.0kb downstream 1.0kb downstream 5551 true scaffold00582: 539125-544675 Cucumis sativus
Cucsa.054220 1.0kb downstream 1.0kb downstream 1000 false scaffold00582: 539125-540124 Cucumis sativus
Cucsa.054220 2.0kb upstream 2.0kb upstream 6551 true scaffold00582: 540125-546675 Cucumis sativus
Cucsa.054220 2.0kb upstream 2.0kb upstream 2000 false scaffold00582: 544676-546675 Cucumis sativus
Cucsa.054220 2.0kb downstream 2.0kb downstream 6551 true scaffold00582: 538125-544675 Cucumis sativus
Cucsa.054220 2.0kb downstream 2.0kb downstream 2000 false scaffold00582: 538125-540124 Cucumis sativus
Cucsa.054220 5.0kb upstream 5.0kb upstream 9551 true scaffold00582: 540125-549675 Cucumis sativus
Cucsa.054220 5.0kb upstream 5.0kb upstream 5000 false scaffold00582: 544676-549675 Cucumis sativus
Cucsa.054220 5.0kb downstream 5.0kb downstream 9551 true scaffold00582: 535125-544675 Cucumis sativus
Cucsa.054220 5.0kb downstream 5.0kb downstream 5000 false scaffold00582: 535125-540124 Cucumis sativus
Cucsa.054220 10.0kb upstream 10.0kb upstream 14551 true scaffold00582: 540125-554675 Cucumis sativus
Cucsa.054220 10.0kb upstream 10.0kb upstream 10000 false scaffold00582: 544676-554675 Cucumis sativus
Cucsa.054220 10.0kb downstream 10.0kb downstream 14551 true scaffold00582: 530125-544675 Cucumis sativus
Cucsa.054220 10.0kb downstream 10.0kb downstream 10000 false scaffold00582: 530125-540124 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303719 5265 Fabidae View MSA
124063737 5270 Rosid View MSA
123738222 5271 Pentapetalae View MSA
122796833 5272 Eudicot View MSA
122044630 5273 Angiosperm View MSA
121346457 5274 Embryophyte View MSA
123428846 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain