Gene : Cucsa.058260 C. sativus v1.0
Defline:  (1 of 2) PTHR11599:SF13 - PROTEASOME SUBUNIT ALPHA TYPE-4 Genomic Order:  68
Name:  ? Cucsa.058260 Secondary Identifier:  ? PAC:16954643
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.058260 0.5kb upstream 0.5kb upstream 3558 true scaffold00614: 485488-489045 Cucumis sativus
Cucsa.058260 0.5kb upstream 0.5kb upstream 500 false scaffold00614: 488546-489045 Cucumis sativus
Cucsa.058260 0.5kb downstream 0.5kb downstream 3558 true scaffold00614: 484988-488545 Cucumis sativus
Cucsa.058260 0.5kb downstream 0.5kb downstream 500 false scaffold00614: 484988-485487 Cucumis sativus
Cucsa.058260 1.0kb upstream 1.0kb upstream 4058 true scaffold00614: 485488-489545 Cucumis sativus
Cucsa.058260 1.0kb upstream 1.0kb upstream 1000 false scaffold00614: 488546-489545 Cucumis sativus
Cucsa.058260 1.0kb downstream 1.0kb downstream 4058 true scaffold00614: 484488-488545 Cucumis sativus
Cucsa.058260 1.0kb downstream 1.0kb downstream 1000 false scaffold00614: 484488-485487 Cucumis sativus
Cucsa.058260 2.0kb upstream 2.0kb upstream 5058 true scaffold00614: 485488-490545 Cucumis sativus
Cucsa.058260 2.0kb upstream 2.0kb upstream 2000 false scaffold00614: 488546-490545 Cucumis sativus
Cucsa.058260 2.0kb downstream 2.0kb downstream 5058 true scaffold00614: 483488-488545 Cucumis sativus
Cucsa.058260 2.0kb downstream 2.0kb downstream 2000 false scaffold00614: 483488-485487 Cucumis sativus
Cucsa.058260 5.0kb upstream 5.0kb upstream 8058 true scaffold00614: 485488-493545 Cucumis sativus
Cucsa.058260 5.0kb upstream 5.0kb upstream 5000 false scaffold00614: 488546-493545 Cucumis sativus
Cucsa.058260 5.0kb downstream 5.0kb downstream 8058 true scaffold00614: 480488-488545 Cucumis sativus
Cucsa.058260 5.0kb downstream 5.0kb downstream 5000 false scaffold00614: 480488-485487 Cucumis sativus
Cucsa.058260 10.0kb upstream 10.0kb upstream 13058 true scaffold00614: 485488-498545 Cucumis sativus
Cucsa.058260 10.0kb upstream 10.0kb upstream 10000 false scaffold00614: 488546-498545 Cucumis sativus
Cucsa.058260 10.0kb downstream 10.0kb downstream 13058 true scaffold00614: 475488-488545 Cucumis sativus
Cucsa.058260 10.0kb downstream 10.0kb downstream 10000 false scaffold00614: 475488-485487 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311313 5265 Fabidae View MSA
124065392 5270 Rosid View MSA
123752544 5271 Pentapetalae View MSA
122786754 5272 Eudicot View MSA
122049144 5273 Angiosperm View MSA
121351432 5274 Embryophyte View MSA
123426590 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain