Gene : Cucsa.065260 C. sativus v1.0
Defline:  (1 of 12) PTHR11771:SF42 - PROTEIN C13C4.7 Genomic Order:  5
Name:  ? Cucsa.065260 Secondary Identifier:  ? PAC:16955026
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5409 Cucumis sativus pathologic  
Csativus PWY-5410 Cucumis sativus pathologic  
Csativus PWY-735 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.065260 0.5kb upstream 0.5kb upstream 5674 true scaffold00696: 39930-45603 Cucumis sativus
Cucsa.065260 0.5kb upstream 0.5kb upstream 500 false scaffold00696: 39930-40429 Cucumis sativus
Cucsa.065260 0.5kb downstream 0.5kb downstream 5674 true scaffold00696: 40430-46103 Cucumis sativus
Cucsa.065260 0.5kb downstream 0.5kb downstream 500 false scaffold00696: 45604-46103 Cucumis sativus
Cucsa.065260 1.0kb upstream 1.0kb upstream 6174 true scaffold00696: 39430-45603 Cucumis sativus
Cucsa.065260 1.0kb upstream 1.0kb upstream 1000 false scaffold00696: 39430-40429 Cucumis sativus
Cucsa.065260 1.0kb downstream 1.0kb downstream 6174 true scaffold00696: 40430-46603 Cucumis sativus
Cucsa.065260 1.0kb downstream 1.0kb downstream 1000 false scaffold00696: 45604-46603 Cucumis sativus
Cucsa.065260 2.0kb upstream 2.0kb upstream 7174 true scaffold00696: 38430-45603 Cucumis sativus
Cucsa.065260 2.0kb upstream 2.0kb upstream 2000 false scaffold00696: 38430-40429 Cucumis sativus
Cucsa.065260 2.0kb downstream 2.0kb downstream 7174 true scaffold00696: 40430-47603 Cucumis sativus
Cucsa.065260 2.0kb downstream 2.0kb downstream 2000 false scaffold00696: 45604-47603 Cucumis sativus
Cucsa.065260 5.0kb upstream 5.0kb upstream 10174 true scaffold00696: 35430-45603 Cucumis sativus
Cucsa.065260 5.0kb upstream 5.0kb upstream 5000 false scaffold00696: 35430-40429 Cucumis sativus
Cucsa.065260 5.0kb downstream 5.0kb downstream 10174 true scaffold00696: 40430-50603 Cucumis sativus
Cucsa.065260 5.0kb downstream 5.0kb downstream 5000 false scaffold00696: 45604-50603 Cucumis sativus
Cucsa.065260 10.0kb upstream 10.0kb upstream 15174 true scaffold00696: 30430-45603 Cucumis sativus
Cucsa.065260 10.0kb upstream 10.0kb upstream 10000 false scaffold00696: 30430-40429 Cucumis sativus
Cucsa.065260 10.0kb downstream 10.0kb downstream 15174 true scaffold00696: 40430-55603 Cucumis sativus
Cucsa.065260 10.0kb downstream 10.0kb downstream 10000 false scaffold00696: 45604-55603 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309355 5265 Fabidae View MSA
124069762 5270 Rosid View MSA
123743667 5271 Pentapetalae View MSA
122789767 5272 Eudicot View MSA
122043119 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain