Gene : Cucsa.065870 C. sativus v1.0
Defline:  (1 of 2) PTHR26312:SF76 - TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN Genomic Order:  66
Name:  ? Cucsa.065870 Secondary Identifier:  ? PAC:16955111
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7437 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.065870 0.5kb upstream 0.5kb upstream 4283 true scaffold00696: 500599-504881 Cucumis sativus
Cucsa.065870 0.5kb upstream 0.5kb upstream 500 false scaffold00696: 504382-504881 Cucumis sativus
Cucsa.065870 0.5kb downstream 0.5kb downstream 4283 true scaffold00696: 500099-504381 Cucumis sativus
Cucsa.065870 0.5kb downstream 0.5kb downstream 500 false scaffold00696: 500099-500598 Cucumis sativus
Cucsa.065870 1.0kb upstream 1.0kb upstream 4783 true scaffold00696: 500599-505381 Cucumis sativus
Cucsa.065870 1.0kb upstream 1.0kb upstream 1000 false scaffold00696: 504382-505381 Cucumis sativus
Cucsa.065870 1.0kb downstream 1.0kb downstream 4783 true scaffold00696: 499599-504381 Cucumis sativus
Cucsa.065870 1.0kb downstream 1.0kb downstream 1000 false scaffold00696: 499599-500598 Cucumis sativus
Cucsa.065870 2.0kb upstream 2.0kb upstream 5783 true scaffold00696: 500599-506381 Cucumis sativus
Cucsa.065870 2.0kb upstream 2.0kb upstream 2000 false scaffold00696: 504382-506381 Cucumis sativus
Cucsa.065870 2.0kb downstream 2.0kb downstream 5783 true scaffold00696: 498599-504381 Cucumis sativus
Cucsa.065870 2.0kb downstream 2.0kb downstream 2000 false scaffold00696: 498599-500598 Cucumis sativus
Cucsa.065870 5.0kb upstream 5.0kb upstream 8783 true scaffold00696: 500599-509381 Cucumis sativus
Cucsa.065870 5.0kb upstream 5.0kb upstream 5000 false scaffold00696: 504382-509381 Cucumis sativus
Cucsa.065870 5.0kb downstream 5.0kb downstream 8783 true scaffold00696: 495599-504381 Cucumis sativus
Cucsa.065870 5.0kb downstream 5.0kb downstream 5000 false scaffold00696: 495599-500598 Cucumis sativus
Cucsa.065870 10.0kb upstream 10.0kb upstream 13783 true scaffold00696: 500599-514381 Cucumis sativus
Cucsa.065870 10.0kb upstream 10.0kb upstream 10000 false scaffold00696: 504382-514381 Cucumis sativus
Cucsa.065870 10.0kb downstream 10.0kb downstream 13783 true scaffold00696: 490599-504381 Cucumis sativus
Cucsa.065870 10.0kb downstream 10.0kb downstream 10000 false scaffold00696: 490599-500598 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299191 5265 Fabidae View MSA
124062008 5270 Rosid View MSA
123737830 5271 Pentapetalae View MSA
122791127 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain