Gene : Cucsa.065990 C. sativus v1.0

Defline:  (1 of 163) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  77
Name:  ? Cucsa.065990 Secondary Identifier:  ? PAC:16955132

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.065990 0.5kb upstream 0.5kb upstream 3068 true scaffold00696: 577656-580723 Cucumis sativus
Cucsa.065990 0.5kb upstream 0.5kb upstream 500 false scaffold00696: 580224-580723 Cucumis sativus
Cucsa.065990 0.5kb downstream 0.5kb downstream 3068 true scaffold00696: 577156-580223 Cucumis sativus
Cucsa.065990 0.5kb downstream 0.5kb downstream 500 false scaffold00696: 577156-577655 Cucumis sativus
Cucsa.065990 1.0kb upstream 1.0kb upstream 3568 true scaffold00696: 577656-581223 Cucumis sativus
Cucsa.065990 1.0kb upstream 1.0kb upstream 1000 false scaffold00696: 580224-581223 Cucumis sativus
Cucsa.065990 1.0kb downstream 1.0kb downstream 3568 true scaffold00696: 576656-580223 Cucumis sativus
Cucsa.065990 1.0kb downstream 1.0kb downstream 1000 false scaffold00696: 576656-577655 Cucumis sativus
Cucsa.065990 2.0kb upstream 2.0kb upstream 4568 true scaffold00696: 577656-582223 Cucumis sativus
Cucsa.065990 2.0kb upstream 2.0kb upstream 2000 false scaffold00696: 580224-582223 Cucumis sativus
Cucsa.065990 2.0kb downstream 2.0kb downstream 4568 true scaffold00696: 575656-580223 Cucumis sativus
Cucsa.065990 2.0kb downstream 2.0kb downstream 2000 false scaffold00696: 575656-577655 Cucumis sativus
Cucsa.065990 5.0kb upstream 5.0kb upstream 7568 true scaffold00696: 577656-585223 Cucumis sativus
Cucsa.065990 5.0kb upstream 5.0kb upstream 5000 false scaffold00696: 580224-585223 Cucumis sativus
Cucsa.065990 5.0kb downstream 5.0kb downstream 7568 true scaffold00696: 572656-580223 Cucumis sativus
Cucsa.065990 5.0kb downstream 5.0kb downstream 5000 false scaffold00696: 572656-577655 Cucumis sativus
Cucsa.065990 10.0kb upstream 10.0kb upstream 12568 true scaffold00696: 577656-590223 Cucumis sativus
Cucsa.065990 10.0kb upstream 10.0kb upstream 10000 false scaffold00696: 580224-590223 Cucumis sativus
Cucsa.065990 10.0kb downstream 10.0kb downstream 12568 true scaffold00696: 567656-580223 Cucumis sativus
Cucsa.065990 10.0kb downstream 10.0kb downstream 10000 false scaffold00696: 567656-577655 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305005 5265 Fabidae View MSA
124065656 5270 Rosid View MSA
123746310 5271 Pentapetalae View MSA
122791948 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain