Gene : Cucsa.066880 C. sativus v1.0
Defline:  (1 of 2) PTHR21290//PTHR21290:SF29 - SPHINGOMYELIN SYNTHETASE Genomic Order:  165
Name:  ? Cucsa.066880 Secondary Identifier:  ? PAC:16955246
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.066880 0.5kb upstream 0.5kb upstream 4391 true scaffold00696: 1286261-1290651 Cucumis sativus
Cucsa.066880 0.5kb upstream 0.5kb upstream 500 false scaffold00696: 1286261-1286760 Cucumis sativus
Cucsa.066880 0.5kb downstream 0.5kb downstream 4391 true scaffold00696: 1286761-1291151 Cucumis sativus
Cucsa.066880 0.5kb downstream 0.5kb downstream 500 false scaffold00696: 1290652-1291151 Cucumis sativus
Cucsa.066880 1.0kb upstream 1.0kb upstream 4891 true scaffold00696: 1285761-1290651 Cucumis sativus
Cucsa.066880 1.0kb upstream 1.0kb upstream 1000 false scaffold00696: 1285761-1286760 Cucumis sativus
Cucsa.066880 1.0kb downstream 1.0kb downstream 4891 true scaffold00696: 1286761-1291651 Cucumis sativus
Cucsa.066880 1.0kb downstream 1.0kb downstream 1000 false scaffold00696: 1290652-1291651 Cucumis sativus
Cucsa.066880 2.0kb upstream 2.0kb upstream 5891 true scaffold00696: 1284761-1290651 Cucumis sativus
Cucsa.066880 2.0kb upstream 2.0kb upstream 2000 false scaffold00696: 1284761-1286760 Cucumis sativus
Cucsa.066880 2.0kb downstream 2.0kb downstream 5891 true scaffold00696: 1286761-1292651 Cucumis sativus
Cucsa.066880 2.0kb downstream 2.0kb downstream 2000 false scaffold00696: 1290652-1292651 Cucumis sativus
Cucsa.066880 5.0kb upstream 5.0kb upstream 8891 true scaffold00696: 1281761-1290651 Cucumis sativus
Cucsa.066880 5.0kb upstream 5.0kb upstream 5000 false scaffold00696: 1281761-1286760 Cucumis sativus
Cucsa.066880 5.0kb downstream 5.0kb downstream 8891 true scaffold00696: 1286761-1295651 Cucumis sativus
Cucsa.066880 5.0kb downstream 5.0kb downstream 5000 false scaffold00696: 1290652-1295651 Cucumis sativus
Cucsa.066880 10.0kb upstream 10.0kb upstream 13891 true scaffold00696: 1276761-1290651 Cucumis sativus
Cucsa.066880 10.0kb upstream 10.0kb upstream 10000 false scaffold00696: 1276761-1286760 Cucumis sativus
Cucsa.066880 10.0kb downstream 10.0kb downstream 13891 true scaffold00696: 1286761-1300651 Cucumis sativus
Cucsa.066880 10.0kb downstream 10.0kb downstream 10000 false scaffold00696: 1290652-1300651 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306014 5265 Fabidae View MSA
124064547 5270 Rosid View MSA
123744784 5271 Pentapetalae View MSA
122788943 5272 Eudicot View MSA
122046269 5273 Angiosperm View MSA
121346433 5274 Embryophyte View MSA
123427335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain