Gene : Cucsa.069390 C. sativus v1.0
Defline:  (1 of 41) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  27
Name:  ? Cucsa.069390 Secondary Identifier:  ? PAC:16955441
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.069390 0.5kb upstream 0.5kb upstream 2602 true scaffold00714: 205196-207797 Cucumis sativus
Cucsa.069390 0.5kb upstream 0.5kb upstream 500 false scaffold00714: 207298-207797 Cucumis sativus
Cucsa.069390 0.5kb downstream 0.5kb downstream 2602 true scaffold00714: 204696-207297 Cucumis sativus
Cucsa.069390 0.5kb downstream 0.5kb downstream 500 false scaffold00714: 204696-205195 Cucumis sativus
Cucsa.069390 1.0kb upstream 1.0kb upstream 3102 true scaffold00714: 205196-208297 Cucumis sativus
Cucsa.069390 1.0kb upstream 1.0kb upstream 1000 false scaffold00714: 207298-208297 Cucumis sativus
Cucsa.069390 1.0kb downstream 1.0kb downstream 3102 true scaffold00714: 204196-207297 Cucumis sativus
Cucsa.069390 1.0kb downstream 1.0kb downstream 1000 false scaffold00714: 204196-205195 Cucumis sativus
Cucsa.069390 2.0kb upstream 2.0kb upstream 4102 true scaffold00714: 205196-209297 Cucumis sativus
Cucsa.069390 2.0kb upstream 2.0kb upstream 2000 false scaffold00714: 207298-209297 Cucumis sativus
Cucsa.069390 2.0kb downstream 2.0kb downstream 4102 true scaffold00714: 203196-207297 Cucumis sativus
Cucsa.069390 2.0kb downstream 2.0kb downstream 2000 false scaffold00714: 203196-205195 Cucumis sativus
Cucsa.069390 5.0kb upstream 5.0kb upstream 7102 true scaffold00714: 205196-212297 Cucumis sativus
Cucsa.069390 5.0kb upstream 5.0kb upstream 5000 false scaffold00714: 207298-212297 Cucumis sativus
Cucsa.069390 5.0kb downstream 5.0kb downstream 7102 true scaffold00714: 200196-207297 Cucumis sativus
Cucsa.069390 5.0kb downstream 5.0kb downstream 5000 false scaffold00714: 200196-205195 Cucumis sativus
Cucsa.069390 10.0kb upstream 10.0kb upstream 12102 true scaffold00714: 205196-217297 Cucumis sativus
Cucsa.069390 10.0kb upstream 10.0kb upstream 10000 false scaffold00714: 207298-217297 Cucumis sativus
Cucsa.069390 10.0kb downstream 10.0kb downstream 12102 true scaffold00714: 195196-207297 Cucumis sativus
Cucsa.069390 10.0kb downstream 10.0kb downstream 10000 false scaffold00714: 195196-205195 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312983 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain