Gene : PREP1 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g020918 Defline:  (1 of 1) PTHR11851:SF68 - PRESEQUENCE PROTEASE 1, CHLOROPLASTIC/MITOCHONDRIAL-RELATED
Genomic Order:  463 Name:  ? Cre01.g020918
Secondary Identifier:  ? PAC:30789146
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g020918 0.5kb upstream 0.5kb upstream 14606 true chromosome_1: 3312671-3327276 Chlamydomonas reinhardtii
Cre01.g020918 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 3326777-3327276 Chlamydomonas reinhardtii
Cre01.g020918 0.5kb downstream 0.5kb downstream 14606 true chromosome_1: 3312171-3326776 Chlamydomonas reinhardtii
Cre01.g020918 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 3312171-3312670 Chlamydomonas reinhardtii
Cre01.g020918 1.0kb upstream 1.0kb upstream 15106 true chromosome_1: 3312671-3327776 Chlamydomonas reinhardtii
Cre01.g020918 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 3326777-3327776 Chlamydomonas reinhardtii
Cre01.g020918 1.0kb downstream 1.0kb downstream 15106 true chromosome_1: 3311671-3326776 Chlamydomonas reinhardtii
Cre01.g020918 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 3311671-3312670 Chlamydomonas reinhardtii
Cre01.g020918 2.0kb upstream 2.0kb upstream 16106 true chromosome_1: 3312671-3328776 Chlamydomonas reinhardtii
Cre01.g020918 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 3326777-3328776 Chlamydomonas reinhardtii
Cre01.g020918 2.0kb downstream 2.0kb downstream 16106 true chromosome_1: 3310671-3326776 Chlamydomonas reinhardtii
Cre01.g020918 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 3310671-3312670 Chlamydomonas reinhardtii
Cre01.g020918 5.0kb upstream 5.0kb upstream 19106 true chromosome_1: 3312671-3331776 Chlamydomonas reinhardtii
Cre01.g020918 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 3326777-3331776 Chlamydomonas reinhardtii
Cre01.g020918 5.0kb downstream 5.0kb downstream 19106 true chromosome_1: 3307671-3326776 Chlamydomonas reinhardtii
Cre01.g020918 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 3307671-3312670 Chlamydomonas reinhardtii
Cre01.g020918 10.0kb upstream 10.0kb upstream 24106 true chromosome_1: 3312671-3336776 Chlamydomonas reinhardtii
Cre01.g020918 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 3326777-3336776 Chlamydomonas reinhardtii
Cre01.g020918 10.0kb downstream 10.0kb downstream 24106 true chromosome_1: 3302671-3326776 Chlamydomonas reinhardtii
Cre01.g020918 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 3302671-3312670 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110339 5260 Chlorophyte View MSA
123424762 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.929        
cufflinks 6.722        
cufflinks 4.735        
cufflinks 4.305        
cufflinks 6.534        
cufflinks 5.851        
cufflinks 3.907        
cufflinks 6.491        
cufflinks 7.099        
cufflinks 2.701       Low
cufflinks 3.52        
cufflinks 5.423        
cufflinks 6.282        
cufflinks 6.495        
cufflinks 3.84        
cufflinks 7.715        
cufflinks 9.49       High
cufflinks 5.213        
cufflinks 1.173       Low
cufflinks 3.064       Low
cufflinks 4.706        
cufflinks 7.296        
cufflinks 2.235       Low
cufflinks 6.749        
cufflinks 9.844       High
cufflinks 66.1366 0.0 135.695 High  
cufflinks 53.3109 10.5568 96.065 High  
cufflinks 38.3538 0.0 79.4677 High  
cufflinks 18.427 0.238972 36.6151    
cufflinks 30.1017 2.75571 57.4478 High  

0 Strain