Gene : ATG6 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g020264 Defline:  (1 of 1) K08334 - beclin 1 (BECN1, VPS30, ATG6)
Genomic Order:  449 Name:  ? Cre01.g020264
Secondary Identifier:  ? PAC:30788893
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g020264 0.5kb upstream 0.5kb upstream 6892 true chromosome_1: 3235687-3242578 Chlamydomonas reinhardtii
Cre01.g020264 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 3235687-3236186 Chlamydomonas reinhardtii
Cre01.g020264 0.5kb downstream 0.5kb downstream 6892 true chromosome_1: 3236187-3243078 Chlamydomonas reinhardtii
Cre01.g020264 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 3242579-3243078 Chlamydomonas reinhardtii
Cre01.g020264 1.0kb upstream 1.0kb upstream 7392 true chromosome_1: 3235187-3242578 Chlamydomonas reinhardtii
Cre01.g020264 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 3235187-3236186 Chlamydomonas reinhardtii
Cre01.g020264 1.0kb downstream 1.0kb downstream 7392 true chromosome_1: 3236187-3243578 Chlamydomonas reinhardtii
Cre01.g020264 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 3242579-3243578 Chlamydomonas reinhardtii
Cre01.g020264 2.0kb upstream 2.0kb upstream 8392 true chromosome_1: 3234187-3242578 Chlamydomonas reinhardtii
Cre01.g020264 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 3234187-3236186 Chlamydomonas reinhardtii
Cre01.g020264 2.0kb downstream 2.0kb downstream 8392 true chromosome_1: 3236187-3244578 Chlamydomonas reinhardtii
Cre01.g020264 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 3242579-3244578 Chlamydomonas reinhardtii
Cre01.g020264 5.0kb upstream 5.0kb upstream 11392 true chromosome_1: 3231187-3242578 Chlamydomonas reinhardtii
Cre01.g020264 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 3231187-3236186 Chlamydomonas reinhardtii
Cre01.g020264 5.0kb downstream 5.0kb downstream 11392 true chromosome_1: 3236187-3247578 Chlamydomonas reinhardtii
Cre01.g020264 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 3242579-3247578 Chlamydomonas reinhardtii
Cre01.g020264 10.0kb upstream 10.0kb upstream 16392 true chromosome_1: 3226187-3242578 Chlamydomonas reinhardtii
Cre01.g020264 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 3226187-3236186 Chlamydomonas reinhardtii
Cre01.g020264 10.0kb downstream 10.0kb downstream 16392 true chromosome_1: 3236187-3252578 Chlamydomonas reinhardtii
Cre01.g020264 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 3242579-3252578 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111699 5260 Chlorophyte View MSA
123428819 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.184        
cufflinks 1.388        
cufflinks 1.455        
cufflinks 1.696        
cufflinks 1.534        
cufflinks 1.052        
cufflinks 1.525        
cufflinks 1.909        
cufflinks 0.826       Low
cufflinks 0.608       Low
cufflinks 1.477        
cufflinks 1.736        
cufflinks 1.369        
cufflinks 1.202        
cufflinks 1.541        
cufflinks 0.992        
cufflinks 2.602       High
cufflinks 1.281        
cufflinks 0.676       Low
cufflinks 2.544       High
cufflinks 1.357        
cufflinks 2.408       High
cufflinks 1.686        
cufflinks 1.941        
cufflinks 2.608       High
cufflinks 4.62041 0.785062 8.45575   High
cufflinks 4.49541 0.844644 8.14617    
cufflinks 9.78999 0.0 19.69    
cufflinks 2.76358 0.380528 5.14663    
cufflinks 2.03565 0.156034 3.91527   Low

0 Strain