Gene : Cre01.g021950 C. reinhardtii v5.6
Defline:  (1 of 1) PF08393//PF12777//PF12781 - Dynein heavy chain, N-terminal region 2 (DHC_N2) // Microtubule-binding stalk of dynein motor (MT) // ATP-binding dynein motor region D5 (AAA_9) Genomic Order:  484
Name:  ? Cre01.g021950 Secondary Identifier:  ? PAC:30789436
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g021950 0.5kb upstream 0.5kb upstream 31169 true chromosome_1: 3434698-3465866 Chlamydomonas reinhardtii
Cre01.g021950 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 3465367-3465866 Chlamydomonas reinhardtii
Cre01.g021950 0.5kb downstream 0.5kb downstream 31169 true chromosome_1: 3434198-3465366 Chlamydomonas reinhardtii
Cre01.g021950 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 3434198-3434697 Chlamydomonas reinhardtii
Cre01.g021950 1.0kb upstream 1.0kb upstream 31669 true chromosome_1: 3434698-3466366 Chlamydomonas reinhardtii
Cre01.g021950 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 3465367-3466366 Chlamydomonas reinhardtii
Cre01.g021950 1.0kb downstream 1.0kb downstream 31669 true chromosome_1: 3433698-3465366 Chlamydomonas reinhardtii
Cre01.g021950 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 3433698-3434697 Chlamydomonas reinhardtii
Cre01.g021950 2.0kb upstream 2.0kb upstream 32669 true chromosome_1: 3434698-3467366 Chlamydomonas reinhardtii
Cre01.g021950 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 3465367-3467366 Chlamydomonas reinhardtii
Cre01.g021950 2.0kb downstream 2.0kb downstream 32669 true chromosome_1: 3432698-3465366 Chlamydomonas reinhardtii
Cre01.g021950 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 3432698-3434697 Chlamydomonas reinhardtii
Cre01.g021950 5.0kb upstream 5.0kb upstream 35669 true chromosome_1: 3434698-3470366 Chlamydomonas reinhardtii
Cre01.g021950 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 3465367-3470366 Chlamydomonas reinhardtii
Cre01.g021950 5.0kb downstream 5.0kb downstream 35669 true chromosome_1: 3429698-3465366 Chlamydomonas reinhardtii
Cre01.g021950 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 3429698-3434697 Chlamydomonas reinhardtii
Cre01.g021950 10.0kb upstream 10.0kb upstream 40669 true chromosome_1: 3434698-3475366 Chlamydomonas reinhardtii
Cre01.g021950 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 3465367-3475366 Chlamydomonas reinhardtii
Cre01.g021950 10.0kb downstream 10.0kb downstream 40669 true chromosome_1: 3424698-3465366 Chlamydomonas reinhardtii
Cre01.g021950 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 3424698-3434697 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086673 5260 Chlorophyte View MSA
123403985 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low Low
cufflinks 0.156     Low  
cufflinks 0.116     Low  
cufflinks 0.177     Low  
cufflinks 0.09     Low  
cufflinks 0.083     Low  
cufflinks 0.167     Low  
cufflinks 0.131     Low  
cufflinks 0.025     Low Low
cufflinks 0.045     Low  
cufflinks 0.197       High
cufflinks 0.132     Low  
cufflinks 0.046     Low  
cufflinks 0.09     Low  
cufflinks 0.154     Low  
cufflinks 0.026     Low Low
cufflinks 0.065     Low  
cufflinks 0.119     Low  
cufflinks 0.038     Low Low
cufflinks 0.287       High
cufflinks 0.133     Low  
cufflinks 0.053     Low  
cufflinks 0.149     Low  
cufflinks 0.106     Low  
cufflinks 0.07     Low  
cufflinks 0.802841 0.136378 1.4693   High
cufflinks 1.07701 0.214437 1.93958    
cufflinks 1.12135 0.0 2.31573   High
cufflinks 0.961179 0.161932 1.76043   High
cufflinks 1.63306 0.327951 2.93818    

0 Strain