Gene : Cre01.g021500 C. reinhardtii v5.6
Defline:  (1 of 1) K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Genomic Order:  475
Name:  ? Cre01.g021500 Secondary Identifier:  ? PAC:30789611
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g021500 0.5kb upstream 0.5kb upstream 6669 true chromosome_1: 3380197-3386865 Chlamydomonas reinhardtii
Cre01.g021500 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 3380197-3380696 Chlamydomonas reinhardtii
Cre01.g021500 0.5kb downstream 0.5kb downstream 6669 true chromosome_1: 3380697-3387365 Chlamydomonas reinhardtii
Cre01.g021500 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 3386866-3387365 Chlamydomonas reinhardtii
Cre01.g021500 1.0kb upstream 1.0kb upstream 7169 true chromosome_1: 3379697-3386865 Chlamydomonas reinhardtii
Cre01.g021500 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 3379697-3380696 Chlamydomonas reinhardtii
Cre01.g021500 1.0kb downstream 1.0kb downstream 7169 true chromosome_1: 3380697-3387865 Chlamydomonas reinhardtii
Cre01.g021500 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 3386866-3387865 Chlamydomonas reinhardtii
Cre01.g021500 2.0kb upstream 2.0kb upstream 8169 true chromosome_1: 3378697-3386865 Chlamydomonas reinhardtii
Cre01.g021500 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 3378697-3380696 Chlamydomonas reinhardtii
Cre01.g021500 2.0kb downstream 2.0kb downstream 8169 true chromosome_1: 3380697-3388865 Chlamydomonas reinhardtii
Cre01.g021500 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 3386866-3388865 Chlamydomonas reinhardtii
Cre01.g021500 5.0kb upstream 5.0kb upstream 11169 true chromosome_1: 3375697-3386865 Chlamydomonas reinhardtii
Cre01.g021500 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 3375697-3380696 Chlamydomonas reinhardtii
Cre01.g021500 5.0kb downstream 5.0kb downstream 11169 true chromosome_1: 3380697-3391865 Chlamydomonas reinhardtii
Cre01.g021500 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 3386866-3391865 Chlamydomonas reinhardtii
Cre01.g021500 10.0kb upstream 10.0kb upstream 16169 true chromosome_1: 3370697-3386865 Chlamydomonas reinhardtii
Cre01.g021500 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 3370697-3380696 Chlamydomonas reinhardtii
Cre01.g021500 10.0kb downstream 10.0kb downstream 16169 true chromosome_1: 3380697-3396865 Chlamydomonas reinhardtii
Cre01.g021500 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 3386866-3396865 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111329 5260 Chlorophyte View MSA
123428295 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.559        
cufflinks 8.907        
cufflinks 8.28        
cufflinks 9.191        
cufflinks 6.426        
cufflinks 6.491        
cufflinks 9.049        
cufflinks 10.031        
cufflinks 3.885       Low
cufflinks 2.281       Low
cufflinks 7.945        
cufflinks 10.571        
cufflinks 3.755       Low
cufflinks 8.045        
cufflinks 9.216        
cufflinks 5.689        
cufflinks 8.083        
cufflinks 6.276        
cufflinks 2.611       Low
cufflinks 13.631     High High
cufflinks 7.065        
cufflinks 7.363        
cufflinks 12.263       High
cufflinks 7.891        
cufflinks 6.154        
cufflinks 5.07342 0.841729 9.30511   High
cufflinks 8.6619 2.2559 15.0679    
cufflinks 20.902 0.0 42.3592    
cufflinks 9.95611 1.08023 18.832    
cufflinks 18.1274 2.9866 33.2682   High

0 Strain