Gene : Cre01.g021550 C. reinhardtii v5.6
Defline:  (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Genomic Order:  476
Name:  ? Cre01.g021550 Secondary Identifier:  ? PAC:30789004
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g021550 0.5kb upstream 0.5kb upstream 6282 true chromosome_1: 3386707-3392988 Chlamydomonas reinhardtii
Cre01.g021550 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 3386707-3387206 Chlamydomonas reinhardtii
Cre01.g021550 0.5kb downstream 0.5kb downstream 6282 true chromosome_1: 3387207-3393488 Chlamydomonas reinhardtii
Cre01.g021550 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 3392989-3393488 Chlamydomonas reinhardtii
Cre01.g021550 1.0kb upstream 1.0kb upstream 6782 true chromosome_1: 3386207-3392988 Chlamydomonas reinhardtii
Cre01.g021550 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 3386207-3387206 Chlamydomonas reinhardtii
Cre01.g021550 1.0kb downstream 1.0kb downstream 6782 true chromosome_1: 3387207-3393988 Chlamydomonas reinhardtii
Cre01.g021550 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 3392989-3393988 Chlamydomonas reinhardtii
Cre01.g021550 2.0kb upstream 2.0kb upstream 7782 true chromosome_1: 3385207-3392988 Chlamydomonas reinhardtii
Cre01.g021550 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 3385207-3387206 Chlamydomonas reinhardtii
Cre01.g021550 2.0kb downstream 2.0kb downstream 7782 true chromosome_1: 3387207-3394988 Chlamydomonas reinhardtii
Cre01.g021550 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 3392989-3394988 Chlamydomonas reinhardtii
Cre01.g021550 5.0kb upstream 5.0kb upstream 10782 true chromosome_1: 3382207-3392988 Chlamydomonas reinhardtii
Cre01.g021550 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 3382207-3387206 Chlamydomonas reinhardtii
Cre01.g021550 5.0kb downstream 5.0kb downstream 10782 true chromosome_1: 3387207-3397988 Chlamydomonas reinhardtii
Cre01.g021550 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 3392989-3397988 Chlamydomonas reinhardtii
Cre01.g021550 10.0kb upstream 10.0kb upstream 15782 true chromosome_1: 3377207-3392988 Chlamydomonas reinhardtii
Cre01.g021550 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 3377207-3387206 Chlamydomonas reinhardtii
Cre01.g021550 10.0kb downstream 10.0kb downstream 15782 true chromosome_1: 3387207-3402988 Chlamydomonas reinhardtii
Cre01.g021550 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 3392989-3402988 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081669 5260 Chlorophyte View MSA
123399385 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.628        
cufflinks 0.802       Low
cufflinks 1.972        
cufflinks 1.385        
cufflinks 1.73        
cufflinks 1.506        
cufflinks 2.517       High
cufflinks 2.658       High
cufflinks 0.849       Low
cufflinks 0.734       Low
cufflinks 1.246        
cufflinks 1.973        
cufflinks 1.122        
cufflinks 1.489        
cufflinks 1.783        
cufflinks 1.448        
cufflinks 2.093        
cufflinks 1.621        
cufflinks 0.768       Low
cufflinks 2.282        
cufflinks 1.551        
cufflinks 2.192        
cufflinks 1.91        
cufflinks 2.382       High
cufflinks 2.538       High
cufflinks 1.41283 0.137487 2.68818    
cufflinks 2.25493 0.279441 4.23041    
cufflinks 3.43467 0.0 7.11838   High
cufflinks 2.73267 0.448243 5.01709    
cufflinks 2.19367 0.254119 4.13323    

0 Strain