Gene : Cre01.g025750 C. reinhardtii v5.6
Defline:  (1 of 1) PF01551 - Peptidase family M23 (Peptidase_M23) Genomic Order:  566
Name:  ? Cre01.g025750 Secondary Identifier:  ? PAC:30789625
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g025750 0.5kb upstream 0.5kb upstream 6622 true chromosome_1: 3949840-3956461 Chlamydomonas reinhardtii
Cre01.g025750 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 3955962-3956461 Chlamydomonas reinhardtii
Cre01.g025750 0.5kb downstream 0.5kb downstream 6622 true chromosome_1: 3949340-3955961 Chlamydomonas reinhardtii
Cre01.g025750 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 3949340-3949839 Chlamydomonas reinhardtii
Cre01.g025750 1.0kb upstream 1.0kb upstream 7122 true chromosome_1: 3949840-3956961 Chlamydomonas reinhardtii
Cre01.g025750 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 3955962-3956961 Chlamydomonas reinhardtii
Cre01.g025750 1.0kb downstream 1.0kb downstream 7122 true chromosome_1: 3948840-3955961 Chlamydomonas reinhardtii
Cre01.g025750 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 3948840-3949839 Chlamydomonas reinhardtii
Cre01.g025750 2.0kb upstream 2.0kb upstream 8122 true chromosome_1: 3949840-3957961 Chlamydomonas reinhardtii
Cre01.g025750 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 3955962-3957961 Chlamydomonas reinhardtii
Cre01.g025750 2.0kb downstream 2.0kb downstream 8122 true chromosome_1: 3947840-3955961 Chlamydomonas reinhardtii
Cre01.g025750 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 3947840-3949839 Chlamydomonas reinhardtii
Cre01.g025750 5.0kb upstream 5.0kb upstream 11122 true chromosome_1: 3949840-3960961 Chlamydomonas reinhardtii
Cre01.g025750 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 3955962-3960961 Chlamydomonas reinhardtii
Cre01.g025750 5.0kb downstream 5.0kb downstream 11122 true chromosome_1: 3944840-3955961 Chlamydomonas reinhardtii
Cre01.g025750 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 3944840-3949839 Chlamydomonas reinhardtii
Cre01.g025750 10.0kb upstream 10.0kb upstream 16122 true chromosome_1: 3949840-3965961 Chlamydomonas reinhardtii
Cre01.g025750 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 3955962-3965961 Chlamydomonas reinhardtii
Cre01.g025750 10.0kb downstream 10.0kb downstream 16122 true chromosome_1: 3939840-3955961 Chlamydomonas reinhardtii
Cre01.g025750 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 3939840-3949839 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080502 5260 Chlorophyte Singleton cluster - no MSA
123398283 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.513        
cufflinks 1.154        
cufflinks 2.972       High
cufflinks 3.259       High
cufflinks 0.486        
cufflinks 1.971        
cufflinks 0.553        
cufflinks 1.776        
cufflinks 0.248       Low
cufflinks 0.316        
cufflinks 3.886       High
cufflinks 1.429        
cufflinks 0.429        
cufflinks 0.632        
cufflinks 1.757        
cufflinks 0.306        
cufflinks 0.445        
cufflinks 1.788        
cufflinks 0.266       Low
cufflinks 0.046     Low Low
cufflinks 1.434        
cufflinks 1.645        
cufflinks 0.26       Low
cufflinks 2.279       High
cufflinks 0.659        
cufflinks 0.030808 0.0 0.0941549 Low  
cufflinks 2.65528 0.0 5.5725    
cufflinks 2.16253 0.0 5.02758    
cufflinks 0.129139 0.0 0.312658 Low High
cufflinks 0.986616 0.0 2.12996   Low

0 Strain