Gene : CPLD38 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g000850 Defline:  (1 of 1) PF11460 - Protein of unknown function (DUF3007) (DUF3007)
Genomic Order:  19 Name:  ? Cre01.g000850
Secondary Identifier:  ? PAC:30789292
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g000850 0.5kb upstream 0.5kb upstream 2506 true chromosome_1: 114410-116915 Chlamydomonas reinhardtii
Cre01.g000850 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 116416-116915 Chlamydomonas reinhardtii
Cre01.g000850 0.5kb downstream 0.5kb downstream 2506 true chromosome_1: 113910-116415 Chlamydomonas reinhardtii
Cre01.g000850 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 113910-114409 Chlamydomonas reinhardtii
Cre01.g000850 1.0kb upstream 1.0kb upstream 3006 true chromosome_1: 114410-117415 Chlamydomonas reinhardtii
Cre01.g000850 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 116416-117415 Chlamydomonas reinhardtii
Cre01.g000850 1.0kb downstream 1.0kb downstream 3006 true chromosome_1: 113410-116415 Chlamydomonas reinhardtii
Cre01.g000850 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 113410-114409 Chlamydomonas reinhardtii
Cre01.g000850 2.0kb upstream 2.0kb upstream 4006 true chromosome_1: 114410-118415 Chlamydomonas reinhardtii
Cre01.g000850 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 116416-118415 Chlamydomonas reinhardtii
Cre01.g000850 2.0kb downstream 2.0kb downstream 4006 true chromosome_1: 112410-116415 Chlamydomonas reinhardtii
Cre01.g000850 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 112410-114409 Chlamydomonas reinhardtii
Cre01.g000850 5.0kb upstream 5.0kb upstream 7006 true chromosome_1: 114410-121415 Chlamydomonas reinhardtii
Cre01.g000850 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 116416-121415 Chlamydomonas reinhardtii
Cre01.g000850 5.0kb downstream 5.0kb downstream 7006 true chromosome_1: 109410-116415 Chlamydomonas reinhardtii
Cre01.g000850 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 109410-114409 Chlamydomonas reinhardtii
Cre01.g000850 10.0kb upstream 10.0kb upstream 12006 true chromosome_1: 114410-126415 Chlamydomonas reinhardtii
Cre01.g000850 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 116416-126415 Chlamydomonas reinhardtii
Cre01.g000850 10.0kb downstream 10.0kb downstream 12006 true chromosome_1: 104410-116415 Chlamydomonas reinhardtii
Cre01.g000850 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 104410-114409 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112744 5260 Chlorophyte View MSA
123428254 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.902     High  
cufflinks 35.215     High  
cufflinks 19.979     High  
cufflinks 26.007     High  
cufflinks 37.333     High  
cufflinks 34.177     High  
cufflinks 10.318       Low
cufflinks 27.566     High  
cufflinks 54.581     High High
cufflinks 21.794     High  
cufflinks 24.659     High  
cufflinks 28.882     High  
cufflinks 28.109     High  
cufflinks 37.012     High  
cufflinks 25.129     High  
cufflinks 55.361     High High
cufflinks 46.151     High  
cufflinks 28.398     High  
cufflinks 4.411       Low
cufflinks 11.338       Low
cufflinks 25.075     High  
cufflinks 44.836     High  
cufflinks 15.259     High  
cufflinks 32.87     High  
cufflinks 47.136     High  
cufflinks 59.3378 0.973564 117.702 High Low
cufflinks 80.2912 18.0076 142.575 High High
cufflinks 20.1974 0.0 40.6017    
cufflinks 30.4859 2.60112 58.3707 High Low
cufflinks 69.1793 8.86204 129.497 High High

0 Strain