Gene : CPLD20 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g000900 Defline:  (1 of 2) PF07082 - Protein of unknown function (DUF1350) (DUF1350)
Genomic Order:  20 Name:  ? Cre01.g000900
Secondary Identifier:  ? PAC:30788866
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g000900 0.5kb upstream 0.5kb upstream 4713 true chromosome_1: 116026-120738 Chlamydomonas reinhardtii
Cre01.g000900 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 116026-116525 Chlamydomonas reinhardtii
Cre01.g000900 0.5kb downstream 0.5kb downstream 4713 true chromosome_1: 116526-121238 Chlamydomonas reinhardtii
Cre01.g000900 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 120739-121238 Chlamydomonas reinhardtii
Cre01.g000900 1.0kb upstream 1.0kb upstream 5213 true chromosome_1: 115526-120738 Chlamydomonas reinhardtii
Cre01.g000900 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 115526-116525 Chlamydomonas reinhardtii
Cre01.g000900 1.0kb downstream 1.0kb downstream 5213 true chromosome_1: 116526-121738 Chlamydomonas reinhardtii
Cre01.g000900 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 120739-121738 Chlamydomonas reinhardtii
Cre01.g000900 2.0kb upstream 2.0kb upstream 6213 true chromosome_1: 114526-120738 Chlamydomonas reinhardtii
Cre01.g000900 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 114526-116525 Chlamydomonas reinhardtii
Cre01.g000900 2.0kb downstream 2.0kb downstream 6213 true chromosome_1: 116526-122738 Chlamydomonas reinhardtii
Cre01.g000900 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 120739-122738 Chlamydomonas reinhardtii
Cre01.g000900 5.0kb upstream 5.0kb upstream 9213 true chromosome_1: 111526-120738 Chlamydomonas reinhardtii
Cre01.g000900 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 111526-116525 Chlamydomonas reinhardtii
Cre01.g000900 5.0kb downstream 5.0kb downstream 9213 true chromosome_1: 116526-125738 Chlamydomonas reinhardtii
Cre01.g000900 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 120739-125738 Chlamydomonas reinhardtii
Cre01.g000900 10.0kb upstream 10.0kb upstream 14213 true chromosome_1: 106526-120738 Chlamydomonas reinhardtii
Cre01.g000900 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 106526-116525 Chlamydomonas reinhardtii
Cre01.g000900 10.0kb downstream 10.0kb downstream 14213 true chromosome_1: 116526-130738 Chlamydomonas reinhardtii
Cre01.g000900 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 120739-130738 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110213 5260 Chlorophyte View MSA
123427638 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.188       Low
cufflinks 11.431        
cufflinks 15.318     High  
cufflinks 21.015     High High
cufflinks 8.968        
cufflinks 10.866        
cufflinks 10.888        
cufflinks 14.567        
cufflinks 2.358       Low
cufflinks 8.74     High  
cufflinks 18.235     High High
cufflinks 10.468        
cufflinks 8.493        
cufflinks 13.339     High  
cufflinks 11.74        
cufflinks 4.185        
cufflinks 4.989        
cufflinks 13.825     High  
cufflinks 3.586       Low
cufflinks 10.796        
cufflinks 12.31        
cufflinks 2.469       Low
cufflinks 9.474        
cufflinks 11.668        
cufflinks 2.126       Low
cufflinks 18.6462 1.61814 35.6744 High High
cufflinks 25.6403 6.78843 44.4921    
cufflinks 58.5436 0.0 120.469 High High
cufflinks 35.3612 0.68785 70.0345 High High
cufflinks 53.0596 5.49694 100.622 High Low

0 Strain